Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4357 and Atu4358 are separated by 74 nucleotidesAtu4358 and Atu4359 overlap by 4 nucleotidesAtu4359 and Atu4360 overlap by 4 nucleotidesAtu4360 and Atu4361 are separated by 113 nucleotides Atu4357: Atu4357 - hypothetical protein, at 1,493,959 to 1,494,624 Atu4357 Atu4358: Atu4358 - ABC transporter permease, at 1,494,699 to 1,495,784 Atu4358 Atu4359: Atu4359 - sugar ABC transporter permease, at 1,495,781 to 1,496,608 Atu4359 Atu4360: Atu4360 - sugar ABC transporter permease, at 1,496,605 to 1,497,507 Atu4360 Atu4361: Atu4361 - sugar ABC transporter substrate-binding protein, at 1,497,621 to 1,498,853 Atu4361
Group Condition Atu4357 Atu4358 Atu4359 Atu4360 Atu4361
phage AgroPhage_C04 +0.1 -0.2 -0.1 -1.1 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.2 -0.5 -0.5 -0.8
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.1 -0.2 -0.2 -0.5
phage AgroPhage_E10 -0.2 -0.4 -0.2 -0.5 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.5 -0.2 -0.2 -0.4 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 -0.8 -0.3 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.3 +0.1 -0.5 -0.3
lb_maize LB_Maize -0.3 -0.0 -0.3 -0.3 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.1 -0.2 -0.5 -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 -0.4 -0.8 -0.1
phage AgroPhage_A01 -0.1 -0.0 +0.0 -0.6 -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 +0.0 -0.6 -0.3
phage AgroPhage_B07 +0.2 +0.1 -0.4 -0.4 -0.6
lb_sorghum_leaf LB_sorghum_leaf -0.4 -0.3 -0.3 +0.1 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.1 -0.5 -0.4 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.2 -0.4 -0.4 -0.3
phage AgroPhage_D10 +0.3 -0.2 -0.5 -0.7 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.3 -0.3 +0.4 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.1 -0.5 +0.3 -0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 -0.2 +0.3 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.0 -0.0 -0.1 -0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 +0.0 +0.4 -0.1
Atjh14 -0.2 +0.1 +0.1 -0.7 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.1 +0.3 -0.5 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.2 -0.1 +0.6 -0.2 +0.1
nitrogen source DL-2-Aminobutyric (N) -0.2 +0.3 +0.5 -0.1 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 -0.2 +0.2 +0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.1 +0.2 +0.5 +0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.0 +1.7 +0.1 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.4 +0.1 +0.3 +0.7
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