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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu4304 and Atu4305 are separated by 242 nucleotides
Atu4305 and Atu4306 are separated by 21 nucleotides
Atu4306 and Atu4307 are separated by 344 nucleotides
Atu4307 and Atu4308 are separated by 287 nucleotides
Atu4304: Atu4304 - hypothetical protein, at 1,427,475 to 1,428,965
Atu4304
Atu4305: Atu4305 - two component sensor kinase, at 1,429,208 to 1,431,850
Atu4305
Atu4306: Atu4306 - two component response regulator, at 1,431,872 to 1,432,231
Atu4306
Atu4307: Atu4307 - hypothetical protein, at 1,432,576 to 1,433,544
Atu4307
Atu4308: Atu4308 - hypothetical protein, at 1,433,832 to 1,434,647
Atu4308
Group
Condition
Atu4304
Atu4305
Atu4306
Atu4307
Atu4308
Atjh14
+0.1
-0.2
-0.8
-0.5
-0.1
Atjh2
-0.2
-0.0
-0.9
-0.2
-0.1
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.1
+0.1
-1.1
-0.3
+0.2
stress
Chloramphenicol 12.5 ug/mL
-0.1
-0.0
-0.5
-0.5
-0.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.5
+0.1
-0.9
-0.2
-0.4
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.1
-0.5
-0.4
-0.1
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
+0.2
-0.9
+0.1
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
-0.1
-0.7
-0.1
+0.0
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.2
-0.4
-0.2
-0.3
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
-0.2
-0.6
+0.4
-0.0
Atjh15
+0.2
+0.1
-0.3
-0.5
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.1
-0.4
-0.4
+0.2
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
+0.1
-0.6
+0.4
+0.1
nitrogen source
DL-2-Aminobutyric (N)
-0.1
+0.4
+0.3
-0.0
-0.5
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.0
+0.6
-0.2
-0.3
phage
AgroPhage_C04
+0.0
+0.0
+0.7
+0.0
-0.4
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
-0.2
+0.1
+0.8
-0.1
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.1
-0.4
+0.9
-0.1
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
-0.0
+0.6
+0.2
-0.2
phage
AgroPhage_A07
-0.1
-0.1
+0.7
-0.1
+0.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.1
+0.8
-0.3
-0.1
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.1
+0.8
-0.2
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
-0.1
+0.9
-0.2
+0.0
phage
AgroPhage_F10
+0.0
+0.4
+0.6
-0.0
-0.2
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
+0.0
+0.6
-0.1
+0.4
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
+0.1
+0.5
+0.3
-0.3
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.1
+0.5
+0.3
+0.2
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
-0.2
+0.7
+0.1
+0.2
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
+0.0
+0.7
+0.1
+0.5
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.1
+0.6
+0.4
+0.4
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