Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu4294 and Atu4295 are separated by 107 nucleotidesAtu4295 and Atu4296 overlap by 11 nucleotidesAtu4296 and Atu4297 are separated by 139 nucleotidesAtu4297 and Atu4298 overlap by 11 nucleotides Atu4294: Atu4294 - oxidoreductase, at 1,417,206 to 1,418,039 Atu4294 Atu4295: Atu4295 - shikimate 5-dehydrogenase, at 1,418,147 to 1,418,995 Atu4295 Atu4296: Atu4296 - dehydrogenase, at 1,418,985 to 1,420,568 Atu4296 Atu4297: Atu4297 - AraC family transcriptional regulator, at 1,420,708 to 1,421,601 Atu4297 Atu4298: Atu4298 - hypothetical protein, at 1,421,591 to 1,423,609 Atu4298
Group Condition Atu4294 Atu4295 Atu4296 Atu4297 Atu4298
carbon source L-Sorbose (C) -0.0 -7.1 -6.3 -6.2 +0.2
carbon source L-Sorbose (C) -0.1 -6.7 -6.6 -6.0 +0.3
carbon source D-Sorbitol (C) -0.0 +0.3 -1.7 -1.8 +0.2
carbon source D-Sorbitol (C) -0.1 +0.5 -1.2 -1.5 -0.0
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 -0.3 -0.3 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.3 -0.2 -0.3 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 -0.0 -0.6 +0.3
phage AgroPhage_E10 +0.4 -0.3 -0.1 -0.5 +0.1
phage AgroPhage_F10 +0.2 +0.2 +0.1 -0.7 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.4 +0.3 -0.8 +0.0
phage AgroPhage_D04 -0.0 +0.2 +0.1 -0.6 +0.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.4 +0.1 +0.3 -0.5 +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 +0.0 -0.5 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.5 +0.3 -0.3 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.1 +0.4 -0.3 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.2 +0.0 +0.4 -0.5 +0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 +0.0 +1.0 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.6 +0.3 -0.4 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.5 +0.0 -0.3 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 +0.3 +0.4 -0.1 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.0 +0.3 +0.5 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.2 +0.4 +0.3 +0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.4 +0.3 +0.4 -0.2 +0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.6 +0.0 +0.3 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.3 +0.3 -0.1 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.2 +0.6 +0.3 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.2 +0.4 +0.3 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 -0.1 +0.7 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.2 +0.4 -0.1 +0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 +0.2 +1.0 +0.1
remove
Atu4294
plot		 remove
Atu4295
plot		 remove
Atu4296		 remove
Atu4297
plot		 remove
Atu4298
plot