Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4279 and Atu4280 are separated by 240 nucleotidesAtu4280 and Atu4281 overlap by 4 nucleotidesAtu4281 and Atu4282 overlap by 4 nucleotidesAtu4282 and Atu4283 overlap by 4 nucleotides Atu4279: Atu4279 - LysR family transcriptional regulator, at 1,403,998 to 1,404,903 Atu4279 Atu4280: Atu4280 - short-chain dehydrogenase, at 1,405,144 to 1,405,923 Atu4280 Atu4281: Atu4281 - amino acid ABC transporter permease, at 1,405,920 to 1,406,627 Atu4281 Atu4282: Atu4282 - amino acid ABC transporter permease, at 1,406,624 to 1,407,382 Atu4282 Atu4283: Atu4283 - ABC transporter permease, at 1,407,379 to 1,408,143 Atu4283
Group Condition Atu4279 Atu4280 Atu4281 Atu4282 Atu4283
Atjh2 -0.2 -0.4 -0.2 -0.1 -0.6
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -1.0 +0.1 -0.2 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.7 +0.2 -0.0 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.6 +0.3 +0.1 -0.3
phage AgroPhage_A07 -0.5 +0.0 -0.3 +0.5 -0.3
phage AgroPhage_F04 +0.0 +0.5 -0.3 -0.2 -0.5
Atjh2 -0.3 +0.2 -0.1 +0.2 -0.4
phage AgroPhage_C04 -0.4 +0.7 -0.6 -0.1 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.3 -0.2 +0.3 -0.3
stress Timentin 3.125 ug/mL -0.6 -0.2 +0.2 +0.1 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -0.4 +0.1 +0.5 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.4 +0.1 -0.2 -0.1
phage AgroPhage_E10 -0.4 -0.2 +0.4 -0.1 +0.3
phage AgroPhage_D10 -0.4 +0.4 -0.2 +0.1 +0.2
stress Chloramphenicol 12.5 ug/mL -0.3 +0.4 -0.1 -0.1 +0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.7 +0.4 -0.1 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.1 -0.2 +0.4 +0.2
phage AgroPhage_E04 -0.2 -0.1 -0.2 +0.2 +0.6
Atjh14 -0.3 +0.6 +0.0 +0.2 -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.0 -0.3 -0.1 +0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.6 +0.3 +0.3 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 -0.1 +0.2 +0.3
nitrogen source DL-2-Aminobutyric (N) -0.1 +0.7 +0.5 -0.5 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.5 +0.4 +0.5 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.2 +0.5 +0.2 +0.1 +0.4
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.2 +0.5 +0.2 +0.3
lb_sorghum_leaf LB_sorghum_leaf +0.3 +0.4 +0.3 +0.2 +0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.5 -0.1 +0.4 +0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.2 +0.1 +0.2 +0.2 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.4 +0.2 +0.3 +0.3
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