Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4263 and Atu4264 are separated by 93 nucleotidesAtu4264 and Atu4265 are separated by 91 nucleotidesAtu4265 and Atu4266 are separated by 34 nucleotidesAtu4266 and Atu4267 are separated by 135 nucleotides Atu4263: Atu4263 - hypothetical protein, at 1,389,268 to 1,390,365 Atu4263 Atu4264: Atu4264 - LysR family transcriptional regulator, at 1,390,459 to 1,391,355 Atu4264 Atu4265: Atu4265 - hypothetical protein, at 1,391,447 to 1,392,061 Atu4265 Atu4266: Atu4266 - GntR family transcriptional regulator, at 1,392,096 to 1,393,442 Atu4266 Atu4267: Atu4267 - hypothetical protein, at 1,393,578 to 1,393,982 Atu4267
Group Condition Atu4263 Atu4264 Atu4265 Atu4266 Atu4267
carbon source trans-aconitic (C) -2.1 -2.0 -0.2 +0.1 -0.1
carbon source trans-aconitic (C) -1.9 -2.2 -0.0 +0.3 -0.0
phage AgroPhage_E10 +0.3 +0.2 -0.8 -0.2 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.6 -0.3 +0.7 -0.7
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.1 -0.6 -0.2 +0.4
Atjh14 -0.5 -0.9 -0.1 +0.4 +0.6
stress R2A with hypochlorite 6.25 mM +0.1 -0.7 -0.2 -0.1 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.6 -0.3 +0.2 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.3 -0.1 +0.2 -0.5
phage AgroPhage_F10 -0.1 +0.2 -0.1 +0.5 -0.6
phage AgroPhage_D04 +0.3 -0.1 -0.7 +0.3 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.7 +0.1 +0.2 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 -0.7 +0.6 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.2 -0.5 +0.1 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 -0.1 +0.6 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 +0.4 -0.3 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 +0.1 +0.6 -0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.6 +0.2 -0.2 +0.8
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.2 +0.7 +0.3 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.4 -0.2 -0.1 +0.6 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.3 -0.2 -0.3 +0.5 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.2 +0.3 +0.3 +0.3
nitrogen source DL-2-Aminobutyric (N) +0.4 +0.1 -0.4 +0.9 -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 -0.3 +0.2 +0.3 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.1 +0.7 +0.4 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.9 -0.0 -0.1 +0.3 +0.1
phage AgroPhage_D10 +0.3 +0.7 -0.1 -0.0 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.0 +0.4 +0.4 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.5 +0.3 +0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 +0.6 +0.4 +0.9
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