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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu4263 and Atu4264 are separated by 93 nucleotides
Atu4264 and Atu4265 are separated by 91 nucleotides
Atu4265 and Atu4266 are separated by 34 nucleotides
Atu4266 and Atu4267 are separated by 135 nucleotides
Atu4263: Atu4263 - hypothetical protein, at 1,389,268 to 1,390,365
Atu4263
Atu4264: Atu4264 - LysR family transcriptional regulator, at 1,390,459 to 1,391,355
Atu4264
Atu4265: Atu4265 - hypothetical protein, at 1,391,447 to 1,392,061
Atu4265
Atu4266: Atu4266 - GntR family transcriptional regulator, at 1,392,096 to 1,393,442
Atu4266
Atu4267: Atu4267 - hypothetical protein, at 1,393,578 to 1,393,982
Atu4267
Group
Condition
Atu4263
Atu4264
Atu4265
Atu4266
Atu4267
carbon source
trans-aconitic (C)
-2.1
-2.0
-0.2
+0.1
-0.1
carbon source
trans-aconitic (C)
-1.9
-2.2
-0.0
+0.3
-0.0
phage
AgroPhage_E10
+0.3
+0.2
-0.8
-0.2
-0.6
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.6
-0.3
+0.7
-0.7
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
-0.1
-0.6
-0.2
+0.4
Atjh14
-0.5
-0.9
-0.1
+0.4
+0.6
stress
R2A with hypochlorite 6.25 mM
+0.1
-0.7
-0.2
-0.1
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
-0.6
-0.3
+0.2
-0.1
in planta
Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
+0.3
-0.1
+0.2
-0.5
phage
AgroPhage_F10
-0.1
+0.2
-0.1
+0.5
-0.6
phage
AgroPhage_D04
+0.3
-0.1
-0.7
+0.3
+0.2
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
-0.7
+0.1
+0.2
+0.4
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.4
-0.1
-0.7
+0.6
-0.2
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.3
-0.2
-0.5
+0.1
+0.3
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.1
-0.1
+0.6
-0.5
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.4
+0.4
-0.3
+0.4
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.4
+0.3
+0.1
+0.6
-0.4
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
-0.6
+0.2
-0.2
+0.8
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.6
+0.2
+0.7
+0.3
-0.2
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
+0.4
-0.2
-0.1
+0.6
-0.3
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days
+0.3
-0.2
-0.3
+0.5
+0.2
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.4
+0.2
+0.3
+0.3
+0.3
nitrogen source
DL-2-Aminobutyric (N)
+0.4
+0.1
-0.4
+0.9
-0.2
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.5
-0.3
+0.2
+0.3
+0.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
-0.1
+0.7
+0.4
-0.2
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.9
-0.0
-0.1
+0.3
+0.1
phage
AgroPhage_D10
+0.3
+0.7
-0.1
-0.0
+0.5
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
+0.0
+0.4
+0.4
+0.6
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.3
+0.2
+0.5
+0.3
+0.5
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.1
+0.6
+0.4
+0.9
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