Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu4259 and Atu4260 are separated by 285 nucleotidesAtu4260 and Atu4261 overlap by 14 nucleotidesAtu4261 and Atu4262 are separated by 9 nucleotidesAtu4262 and Atu4263 are separated by 117 nucleotides Atu4259: Atu4259 - oligopeptide ABC transporter substrate-binding protein, at 1,384,746 to 1,386,341 Atu4259 Atu4260: Atu4260 - ABC transporter permease, at 1,386,627 to 1,387,403 Atu4260 Atu4261: Atu4261 - ABC transporter permease, at 1,387,390 to 1,388,211 Atu4261 Atu4262: Atu4262 - ABC transporter substrate binding protein, at 1,388,221 to 1,389,150 Atu4262 Atu4263: Atu4263 - hypothetical protein, at 1,389,268 to 1,390,365 Atu4263
Group Condition Atu4259 Atu4260 Atu4261 Atu4262 Atu4263
carbon source trans-aconitic (C) +0.0 -2.2 -2.5 -2.2 -2.1
carbon source trans-aconitic (C) -0.1 -1.8 -1.9 -1.8 -1.9
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.0 -0.3 -0.3 -0.4
phage AgroPhage_C04 -0.0 -0.4 -0.4 -0.1 +0.1
lb_ntabacum_leaf LB_Ntabacum_leaf -0.4 -0.2 +0.1 -0.1 -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.1 -0.1 -0.2 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.3 -0.2 -0.1 +0.2
lb_tomato_leaf LB_Tomato_Leaf -0.3 -0.1 +0.2 -0.2 -0.2
lb_cucumber_cotlyden LB_cucumber_cotlyden -0.5 -0.2 +0.0 +0.1 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.0 +0.1 -0.1 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 -0.3 +0.0 +0.2
phage AgroPhage_E10 -0.0 -0.6 -0.3 +0.2 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.1 +0.1 -0.5 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.1 -0.1 -0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.2 -0.2 -0.4 +0.2
phage AgroPhage_D04 +0.3 -0.3 +0.0 -0.1 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.1 -0.2 -0.2 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.1 +0.3 +0.4 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.0 +0.2 -0.3 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.6 -0.1 -0.3 +0.1
carbon source D-Saccharic potassium salt (C) +0.3 +0.1 +0.2 +0.2 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 +0.3 +0.1 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.1 +0.3 -0.2 +0.3 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.5 +0.2 +0.2 -0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 +0.2 +0.1 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.5 +0.2 +0.2 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.2 +0.2 +0.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.3 +0.3 +0.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 +0.4 +0.4 +0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.0 +0.3 +0.3 +0.9
remove
Atu4259
plot
remove
Atu4260
plot
remove
Atu4261
remove
Atu4262
plot
remove
Atu4263
plot