Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4247 and Atu4248 are separated by 7 nucleotidesAtu4248 and Atu4249 are separated by 249 nucleotidesAtu4249 and Atu4250 are separated by 14 nucleotidesAtu4250 and Atu4251 overlap by 11 nucleotides Atu4247: Atu4247 - aldehyde dehydrogenase, at 1,371,293 to 1,372,747 Atu4247 Atu4248: Atu4248 - hypothetical protein, at 1,372,755 to 1,373,036 Atu4248 Atu4249: Atu4249 - sugars ABC transporter ATPase, at 1,373,286 to 1,374,329 Atu4249 Atu4250: Atu4250 - sugar ABC transporter permease, at 1,374,344 to 1,375,186 Atu4250 Atu4251: Atu4251 - sugar ABC transporter permease, at 1,375,176 to 1,376,102 Atu4251
Group Condition Atu4247 Atu4248 Atu4249 Atu4250 Atu4251
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. +0.1 -0.1 -0.5
nophagecontrol No phage control -0.3 N.D. -0.4 -0.1 -0.1
stress Chloramphenicol 12.5 ug/mL +0.1 N.D. -0.1 -0.7 -0.0
nitrogen source DL-2-Aminobutyric (N) +0.2 N.D. -0.3 +0.1 -0.6
phage AgroPhage_E04 -0.3 N.D. +0.0 -0.4 +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. +0.2 -0.4 -0.1
phage AgroPhage_D10 -0.1 N.D. +0.4 -0.6 +0.0
phage AgroPhage_F10 -0.4 N.D. +0.3 -0.2 -0.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. -0.4 -0.2 +0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. -0.6 +0.2 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. -0.4 +0.3 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. +0.3 +0.2 -0.3
stress Chloramphenicol 12.5 ug/mL -0.2 N.D. +0.4 +0.0 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. +0.3 +0.2 -0.3
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 N.D. -0.2 +0.3 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. -0.4 +0.3 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 N.D. +0.4 +0.4 +0.0
phage AgroPhage_F04 -0.1 N.D. +0.4 +0.4 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 N.D. +0.6 +0.2 +0.1
Atjh15 +0.1 N.D. -0.1 +0.5 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. +0.1 +0.7 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 N.D. +0.2 +0.1 +0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 N.D. +0.1 +0.4 +0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. +0.2 +0.3 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. +0.3 +0.5 -0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 N.D. +0.6 +0.3 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. -0.1 +0.3 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 N.D. +0.6 +0.4 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 N.D. +0.2 +0.5 +0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 N.D. +0.7 +0.4 +0.2
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