Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu4235	Atu4236	Atu4237	Atu4238	Atu4239
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.3	-0.2	+0.7	-0.7	-0.8
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.4	-0.1	-0.5	-0.5
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.5	-1.0	-0.9	+0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.0	-0.2	+0.3	-0.6	-0.5
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.3	-0.6	-0.3	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.3	+0.2	-0.2	-0.4	-0.5
	Atjh14	+0.2	-0.7	+0.3	-0.6	+0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.4	+0.1	-0.2	-0.5
phage	AgroPhage_C04	+0.0	-0.1	+0.7	-0.8	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5	-0.2	+0.2	-0.5	-0.3
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.6	-0.6	+0.2	-0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.9	-0.7	+0.4	-0.6
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	+0.5	-0.3	-0.7	+0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.3	-0.6	+0.5	-0.0
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	+0.2	-0.7	+0.7	+0.2
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	+0.4	+0.2	-0.6	+0.3	+0.1
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	+0.2	+0.1	+0.8	-0.4	-0.1
carbon source	Rhamnogalacturonan - from potato (C)	-0.2	+0.4	-0.5	+0.5	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	+0.2	-0.4	+0.5	+0.2
no phage	P2L5	-0.1	+0.4	+0.5	-0.3	+0.3
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.5	+1.3	+0.1	-0.4
stress	R2A with Vancomycin 0.009 mM	+0.4	+0.3	+1.3	-0.4	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.9	+0.4	-0.1	-0.2	+0.2
nitrogen source	DL-2-Aminobutyric (N)	-0.1	-0.3	+1.4	+0.1	+0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.1	+0.8	+0.6	-0.1
carbon source	gluconate (C)	-0.1	+0.1	+1.7	+0.3	-0.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	+0.3	+0.8	+0.8	-0.1
carbon source	gluconate (C)	+0.1	+0.2	+1.8	+0.5	+0.1
carbon source	D-Saccharic potassium salt (C)	-0.2	+0.2	+3.2	-0.3	+0.1
carbon source	D-Saccharic potassium salt (C)	+0.2	-0.0	+3.4	+0.1	+0.0