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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu4212 and Atu4213 are separated by 110 nucleotides
Atu4213 and Atu4214 are separated by 133 nucleotides
Atu4214 and Atu4215 are separated by 300 nucleotides
Atu4215 and Atu4216 are separated by 55 nucleotides
Atu4212: Atu4212 - glycerophosphodiester phosphodiesterase, at 1,335,428 to 1,336,174
Atu4212
Atu4213: Atu4213 - hypothetical protein, at 1,336,285 to 1,336,665
Atu4213
Atu4214: Atu4214 - cold shock protein, at 1,336,799 to 1,337,029
Atu4214
Atu4215: Atu4215 - cell division protein, at 1,337,330 to 1,337,776
Atu4215
Atu4216: Atu4216 - 3-oxoacyl-ACP synthase, at 1,337,832 to 1,339,130
Atu4216
Group
Condition
Atu4212
Atu4213
Atu4214
Atu4215
Atu4216
phage
AgroPhage_C04
-0.4
-1.6
+0.2
-1.2
+0.2
phage
AgroPhage_C10
-0.1
-0.6
-0.7
-0.3
+0.1
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
+0.1
-1.2
+0.2
-0.1
phage
AgroPhage_D07
-0.3
-0.4
-0.6
+0.2
-0.1
phage
AgroPhage_E10
-0.1
-0.9
-0.5
+0.1
+0.2
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.5
+0.4
-0.4
-0.3
-0.3
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
+0.1
-0.7
-0.3
+0.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-1.1
+0.7
-0.7
+0.1
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
+0.3
-0.9
+0.1
-0.2
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.5
+0.5
-0.2
-0.2
+0.1
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
+0.2
-0.4
-0.6
+0.2
phage
AgroPhage_D04
-0.6
+0.6
+0.2
-0.2
-0.4
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.3
-0.6
+0.1
-0.3
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.6
+0.6
-0.2
-0.3
+0.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
+0.3
-0.8
-0.2
+0.3
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.4
-0.1
+0.3
+0.4
-0.3
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.2
-0.4
+0.4
-0.5
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.5
-0.6
+0.4
+0.8
-0.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.2
-0.6
+0.1
+0.3
+0.3
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
-0.0
-0.6
+0.7
+0.0
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.5
+0.4
-0.1
+0.7
-0.1
no phage
P4L5
+0.2
+0.6
-0.4
+0.2
+0.2
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
+0.1
-0.1
+0.8
-0.2
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
+0.1
+0.4
+0.8
-0.3
nitrogen source
DL-2-Aminobutyric (N)
+0.4
+0.8
+0.5
-0.9
+0.3
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.6
+0.3
+0.4
-0.3
in planta
Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-0.1
+0.4
+0.4
+0.6
-0.0
phage
AgroPhage_F04
+0.2
-0.1
+1.0
+0.4
-0.1
stress
R2A with Vancomycin 0.009 mM
+0.2
+0.3
+1.0
+0.4
+0.2
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
+1.0
+0.6
+0.6
+0.1
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