Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4212 and Atu4213 are separated by 110 nucleotidesAtu4213 and Atu4214 are separated by 133 nucleotidesAtu4214 and Atu4215 are separated by 300 nucleotidesAtu4215 and Atu4216 are separated by 55 nucleotides Atu4212: Atu4212 - glycerophosphodiester phosphodiesterase, at 1,335,428 to 1,336,174 Atu4212 Atu4213: Atu4213 - hypothetical protein, at 1,336,285 to 1,336,665 Atu4213 Atu4214: Atu4214 - cold shock protein, at 1,336,799 to 1,337,029 Atu4214 Atu4215: Atu4215 - cell division protein, at 1,337,330 to 1,337,776 Atu4215 Atu4216: Atu4216 - 3-oxoacyl-ACP synthase, at 1,337,832 to 1,339,130 Atu4216
Group Condition Atu4212 Atu4213 Atu4214 Atu4215 Atu4216
phage AgroPhage_C04 -0.4 -1.6 +0.2 -1.2 +0.2
phage AgroPhage_C10 -0.1 -0.6 -0.7 -0.3 +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.1 -1.2 +0.2 -0.1
phage AgroPhage_D07 -0.3 -0.4 -0.6 +0.2 -0.1
phage AgroPhage_E10 -0.1 -0.9 -0.5 +0.1 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 +0.4 -0.4 -0.3 -0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.1 -0.7 -0.3 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -1.1 +0.7 -0.7 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.3 -0.9 +0.1 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.5 -0.2 -0.2 +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.2 -0.4 -0.6 +0.2
phage AgroPhage_D04 -0.6 +0.6 +0.2 -0.2 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 -0.6 +0.1 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.6 -0.2 -0.3 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 -0.8 -0.2 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.1 +0.3 +0.4 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 -0.4 +0.4 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.6 +0.4 +0.8 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.6 +0.1 +0.3 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.0 -0.6 +0.7 +0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.4 -0.1 +0.7 -0.1
no phage P4L5 +0.2 +0.6 -0.4 +0.2 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 -0.1 +0.8 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.1 +0.4 +0.8 -0.3
nitrogen source DL-2-Aminobutyric (N) +0.4 +0.8 +0.5 -0.9 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.6 +0.3 +0.4 -0.3
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 +0.4 +0.4 +0.6 -0.0
phage AgroPhage_F04 +0.2 -0.1 +1.0 +0.4 -0.1
stress R2A with Vancomycin 0.009 mM +0.2 +0.3 +1.0 +0.4 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +1.0 +0.6 +0.6 +0.1
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