Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu4198 and Atu4199 are separated by 70 nucleotidesAtu4199 and Atu4200 are separated by 95 nucleotidesAtu4200 and Atu4201 overlap by 2 nucleotidesAtu4201 and Atu4202 are separated by 439 nucleotides Atu4198: Atu4198 - hypothetical protein, at 1,321,906 to 1,322,202 Atu4198 Atu4199: Atu4199 - TetR family transcriptional regulator, at 1,322,273 to 1,322,845 Atu4199 Atu4200: Atu4200 - hypothetical protein, at 1,322,941 to 1,323,429 Atu4200 Atu4201: Atu4201 - flavodoxin, WrbA-like protein, at 1,323,428 to 1,324,009 Atu4201 Atu4202: Atu4202 - methyltransferase, at 1,324,449 to 1,325,150 Atu4202
Group Condition Atu4198 Atu4199 Atu4200 Atu4201 Atu4202
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.9 -1.7 -0.1 -0.5
stress R2A with m-arsenite 0.8 mM +0.0 -2.5 -0.3 -0.2 -0.1
stress R2A with m-arsenite 0.8 mM -0.3 -3.0 +0.7 +0.0 +0.1
stress R2A with Nitrofurantoin 0.4 mg/mL +0.0 -2.0 -0.3 -0.0 -0.0
phage AgroPhage_C10 -0.6 -0.7 -0.8 -0.2 +0.2
stress R2A with Nitrofurantoin 0.4 mg/mL +0.0 -2.3 +0.3 -0.1 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.3 -0.9 +0.2 -0.6
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.2 -0.3 +0.3 -0.9
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.7 -0.8 +0.3 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.1 -0.9 +0.4 +0.3 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -1.2 +0.6 -0.3 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.6 -1.0 -0.2 -0.1
carbon source D-Saccharic potassium salt (C) +0.4 -0.5 -1.0 +0.0 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -1.0 +0.7 -0.3 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.7 -0.6 +0.2 -0.1
stress Chloramphenicol 12.5 ug/mL -0.6 +0.0 +0.7 +0.0 -0.7
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.5 -0.8 +0.3 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -1.0 +0.5 -0.1 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -0.4 +0.7 +0.1 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -1.1 +0.8 +0.1 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.9 +0.6 +0.1 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -1.1 +1.1 +0.5 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +0.3 -0.9 +0.4 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.5 +0.9 -0.2 -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 -0.2 +0.9 +0.4 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.9 +2.7 +0.0 -0.3
nitrogen source DL-2-Aminobutyric (N) +0.4 -0.4 +1.8 -0.1 -0.3
Atjh10 +0.2 -0.2 +1.5 +0.2 +0.1
Atjh14 +0.4 +0.2 +1.5 -0.1 +0.0
stress R2A with Vancomycin 0.009 mM +0.5 +1.2 +0.4 +0.0 +0.1
remove
Atu4198
plot		 remove
Atu4199
plot		 remove
Atu4200		 remove
Atu4201
plot		 remove
Atu4202
plot