Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4197 and Atu4198 are separated by 186 nucleotidesAtu4198 and Atu4199 are separated by 70 nucleotidesAtu4199 and Atu4200 are separated by 95 nucleotidesAtu4200 and Atu4201 overlap by 2 nucleotides Atu4197: Atu4197 - hypothetical protein, at 1,320,844 to 1,321,719 Atu4197 Atu4198: Atu4198 - hypothetical protein, at 1,321,906 to 1,322,202 Atu4198 Atu4199: Atu4199 - TetR family transcriptional regulator, at 1,322,273 to 1,322,845 Atu4199 Atu4200: Atu4200 - hypothetical protein, at 1,322,941 to 1,323,429 Atu4200 Atu4201: Atu4201 - flavodoxin, WrbA-like protein, at 1,323,428 to 1,324,009 Atu4201
Group Condition Atu4197 Atu4198 Atu4199 Atu4200 Atu4201
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.2 -0.9 -1.7 -0.1
stress R2A with m-arsenite 0.8 mM -0.1 +0.0 -2.5 -0.3 -0.2
phage AgroPhage_C10 -0.5 -0.6 -0.7 -0.8 -0.2
stress R2A with m-arsenite 0.8 mM -0.2 -0.3 -3.0 +0.7 +0.0
stress R2A with Nitrofurantoin 0.4 mg/mL +0.1 +0.0 -2.0 -0.3 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.8 -1.2 +0.6 -0.3
stress R2A with Nitrofurantoin 0.4 mg/mL +0.1 +0.0 -2.3 +0.3 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.3 -0.6 -1.0 -0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.4 -0.7 -0.8 +0.3
phage AgroPhage_E04 +0.1 -0.8 -0.3 -0.7 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.6 -0.3 -0.9 +0.2
carbon source D-Saccharic potassium salt (C) -0.2 +0.4 -0.5 -1.0 +0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 +0.6 -0.7 -0.6 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -1.1 -0.9 +0.4 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.3 -1.0 +0.5 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 -1.0 +0.7 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.7 -0.4 +0.7 +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 -0.5 -0.8 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.1 -1.1 +0.8 +0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.9 -0.2 +0.9 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.4 -0.5 +0.9 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 -1.1 +1.1 +0.5
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.3 -0.3 -0.6 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.4 -0.9 +0.6 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.7 +0.3 -0.9 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.2 -0.9 +2.7 +0.0
nitrogen source DL-2-Aminobutyric (N) -0.4 +0.4 -0.4 +1.8 -0.1
Atjh10 +0.0 +0.2 -0.2 +1.5 +0.2
Atjh14 +0.1 +0.4 +0.2 +1.5 -0.1
stress R2A with Vancomycin 0.009 mM +0.4 +0.5 +1.2 +0.4 +0.0
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