Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu4194	Atu4195	Atu4196	Atu4197	Atu4198
carbon source	D-Galacturonic Acid (C)	-2.0	-1.7	-0.3	+0.3	-0.0
carbon source	D-Galacturonic Acid (C)	-1.3	-1.4	-0.3	+0.1	+0.0
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.0	-0.2	-0.3	-0.2	-0.7
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.2	-0.4	-0.5	-0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	-0.3	+0.1	-0.5	-0.3
phage	AgroPhage_C10	-0.1	-0.2	+0.2	-0.5	-0.6
phage	AgroPhage_F04	-0.2	-0.1	-0.6	+0.3	-0.4
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.1	+0.3	-0.0	-0.9
phage	AgroPhage_F10	-0.0	-0.1	+0.2	-0.3	-0.6
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.3	-0.5	+0.0	-0.8
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.1	-0.5	-0.1	-0.5
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.1	+0.3	+0.2	-1.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.2	+0.5	-0.3	-0.8
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.2	-0.5	+0.1	-0.6
carbon source	Rhamnogalacturonan - from potato (C)	-0.3	+0.2	+0.1	+0.3	-0.5
phage	phage 95.1	-0.0	-0.3	-0.5	-0.1	+0.6
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	+0.2	+0.4	-0.3	+0.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.2	+0.3	+0.2	-0.4
phage	AgroPhage_D04	+0.2	+0.1	-0.1	+0.5	-0.5
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.3	+0.2	-0.8	+0.6
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	+0.2	+0.3	+0.4	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	-0.1	+0.3	+0.7	-0.0
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.3	+0.7	+0.3	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	+0.3	+0.5	-0.3	-0.2
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.2	+0.5	+0.2	+0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.2	-0.2	+0.4	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	+0.4	-0.1	+0.2	+0.4
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.3	+0.1	+0.8	+0.3
stress	R2A with Vancomycin 0.009 mM	-0.2	+0.1	+0.1	+0.4	+0.5
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.2	+0.2	-0.2	+0.7