Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4171 and Atu8038 are separated by 0 nucleotidesAtu8038 and Atu4172 are separated by 136 nucleotidesAtu4172 and Atu4173 are separated by 175 nucleotidesAtu4173 and Atu4174 are separated by 29 nucleotides Atu4171: Atu4171 - cold-shock dead-box protein A, at 1,289,460 to 1,291,307 Atu4171 Atu8038: Atu8038 - hypothetical protein, at 1,291,308 to 1,291,562 Atu8038 Atu4172: Atu4172 - aspartate kinase, at 1,291,699 to 1,292,976 Atu4172 Atu4173: Atu4173 - phosphoenolpyruvate-protein phosphotransferase, at 1,293,152 to 1,295,419 Atu4173 Atu4174: Atu4174 - peptide chain release factor 1, at 1,295,449 to 1,296,531 Atu4174
Group Condition Atu4171 Atu8038 Atu4172 Atu4173 Atu4174
stress R2A with m-arsenite 0.8 mM +0.2 -0.0 N.D. -5.8 N.D.
nitrogen source NAG (N) -0.2 +0.0 N.D. -3.6 N.D.
nitrogen source NAG (N) -0.2 +0.0 N.D. -3.2 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -0.5 N.D. -2.0 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.1 N.D. -2.2 N.D.
nitrogen source Ethanolamine (N) -0.0 +0.0 N.D. -3.0 N.D.
stress Streptomycin 200 ug/mL +1.1 +0.3 N.D. -4.2 N.D.
nitrogen source 2,6-diaminopimelic (N) -0.0 -0.1 N.D. -2.7 N.D.
nitrogen source 2,6-diaminopimelic (N) -0.2 -0.1 N.D. -2.4 N.D.
stress R2A with m-arsenite 0.8 mM +0.5 +0.2 N.D. -3.4 N.D.
carbon source D-Mannose (C) -0.0 -0.0 N.D. -2.7 N.D.
carbon source D-Mannitol (C) +0.1 +0.2 N.D. -3.0 N.D.
carbon source acetate (C) +0.1 +0.3 N.D. -3.0 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 N.D. -2.2 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.0 N.D. -2.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 -0.3 N.D. -1.2 N.D.
phage AgroPhage_D04 -1.0 -0.5 N.D. -1.0 N.D.
nitrogen source L-Proline (N) -0.0 +0.0 N.D. -2.5 N.D.
carbon source L-Alanine (C) +0.0 +0.0 N.D. -2.4 N.D.
carbon source D-Ribose (C) +0.2 -0.1 N.D. -2.3 N.D.
carbon source acetate (C) +0.2 +0.1 N.D. -2.6 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.0 N.D. -2.5 N.D.
carbon source Myristic (C) +0.2 -0.1 N.D. -2.2 N.D.
stress Chloramphenicol 12.5 ug/mL +0.2 +0.3 N.D. -2.5 N.D.
carbon source D-Mannitol (C) +0.2 +0.1 N.D. -2.3 N.D.
phage AgroPhage_E10 -1.4 -0.8 N.D. +0.6 N.D.
stress Streptomycin 200 ug/mL +1.2 +0.4 N.D. -2.4 N.D.
stress R2A with Vancomycin 0.009 mM +2.6 +1.1 N.D. -1.2 N.D.
nitrogen source DL-2-Aminobutyric (N) -0.1 +0.3 N.D. +2.3 N.D.
stress R2A with Vancomycin 0.009 mM +3.2 +1.4 N.D. -2.0 N.D.
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