Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4143 and Atu4144 are separated by 43 nucleotidesAtu4144 and Atu4145 are separated by 52 nucleotidesAtu4145 and Atu4146 overlap by 1 nucleotidesAtu4146 and Atu4147 are separated by 10 nucleotides Atu4143: Atu4143 - hypothetical protein, at 1,261,025 to 1,261,246 Atu4143 Atu4144: Atu4144 - hypothetical protein, at 1,261,290 to 1,261,481 Atu4144 Atu4145: Atu4145 - hypothetical protein, at 1,261,534 to 1,262,358 Atu4145 Atu4146: Atu4146 - hypothetical protein, at 1,262,358 to 1,264,235 Atu4146 Atu4147: Atu4147 - glutathione synthetase, at 1,264,246 to 1,265,292 Atu4147
Group Condition Atu4143 Atu4144 Atu4145 Atu4146 Atu4147
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -4.9 -0.0 +0.1 +0.2
stress Chloramphenicol 12.5 ug/mL -0.6 -3.8 +0.0 -0.0 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -4.7 +0.2 +0.1 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -3.4 +0.0 -0.1 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -3.7 +0.3 +0.1 -0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -2.7 -0.2 -0.1 -0.4
phage AgroPhage_F03 +0.4 -3.4 +0.0 +0.0 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -1.8 -0.2 -0.0 -0.3
Atjh14 -0.2 -2.7 +0.0 +0.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -1.2 -0.6 -0.0 -0.3
Atjh2 -0.2 -2.2 +0.1 -0.1 +0.2
phage AgroPhage_E04 +0.1 -1.5 -0.4 -0.2 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -1.4 +0.0 +0.0 -0.3
phage Phage 97.3 + bacteria +0.2 -2.3 +0.1 +0.0 -0.1
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -1.6 +0.2 -0.1 -0.3
stress R2A with copper (II) chloride 0.04 mM +0.4 -1.7 +0.0 +0.0 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 -1.9 +0.1 +0.1 -0.0
phage AgroPhage_C10 +0.9 -1.0 -0.2 +0.0 -0.1
carbon source Rhamnogalacturonan - from potato (C) +0.8 -1.4 +0.2 +0.1 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.9 +1.2 -0.4 -0.1 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +1.6 -0.8 -0.1 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.9 +1.3 +0.0 -0.1 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +1.9 -0.4 +0.0 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.2 -0.8 +0.2 -0.0 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +1.6 +0.2 +0.0 -0.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +1.5 +0.1 +0.2 -0.4
nitrogen source DL-2-Aminobutyric (N) +2.0 -1.2 +0.4 +0.4 +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +1.9 +0.2 +0.0 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.2 -0.2 +0.3 +0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +2.2 +0.4 +0.0 -0.2
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