Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4142 and Atu4143 are separated by 18 nucleotidesAtu4143 and Atu4144 are separated by 43 nucleotidesAtu4144 and Atu4145 are separated by 52 nucleotidesAtu4145 and Atu4146 overlap by 1 nucleotides Atu4142: Atu4142 - proteinase, at 1,260,446 to 1,261,006 Atu4142 Atu4143: Atu4143 - hypothetical protein, at 1,261,025 to 1,261,246 Atu4143 Atu4144: Atu4144 - hypothetical protein, at 1,261,290 to 1,261,481 Atu4144 Atu4145: Atu4145 - hypothetical protein, at 1,261,534 to 1,262,358 Atu4145 Atu4146: Atu4146 - hypothetical protein, at 1,262,358 to 1,264,235 Atu4146
Group Condition Atu4142 Atu4143 Atu4144 Atu4145 Atu4146
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 -4.7 +0.2 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -4.9 -0.0 +0.1
stress Chloramphenicol 12.5 ug/mL +0.4 -0.6 -3.8 +0.0 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.2 -3.4 +0.0 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.0 -2.7 -0.2 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.1 -3.7 +0.3 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.3 -1.8 -0.2 -0.0
phage AgroPhage_F03 +0.3 +0.4 -3.4 +0.0 +0.0
Atjh14 +0.5 -0.2 -2.7 +0.0 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.3 -1.2 -0.6 -0.0
lb_arabidopsis_leaf LB_arabidopsis_leaf -0.2 -0.2 -1.5 -0.1 -0.1
Atjh2 +0.2 -0.2 -2.2 +0.1 -0.1
phage Phage 97.3 + bacteria -0.0 +0.2 -2.3 +0.1 +0.0
phage AgroPhage_E04 +0.2 +0.1 -1.5 -0.4 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.6 -1.3 +0.1 -0.1
carbon source D-Cellobiose (C) +0.2 -0.0 -1.7 +0.1 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.5 -1.9 +0.1 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.9 +1.2 -0.4 -0.1
carbon source Rhamnogalacturonan - from potato (C) +0.2 +0.8 -1.4 +0.2 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.5 +1.6 -0.8 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.9 +1.3 +0.0 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +1.2 -0.8 +0.2 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.5 +1.1 +0.4 -0.0
nophagecontrol No phage control -0.2 +0.4 +1.3 -0.2 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.4 +1.9 -0.4 +0.0
nitrogen source DL-2-Aminobutyric (N) -0.0 +2.0 -1.2 +0.4 +0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 +1.6 +0.2 +0.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.1 +1.9 +0.2 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.7 +1.2 -0.2 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.1 +2.2 +0.4 +0.0
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