Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4140 and Atu4141 are separated by 55 nucleotidesAtu4141 and Atu4142 are separated by 58 nucleotidesAtu4142 and Atu4143 are separated by 18 nucleotidesAtu4143 and Atu4144 are separated by 43 nucleotides Atu4140: Atu4140 - hypothetical protein, at 1,259,031 to 1,259,891 Atu4140 Atu4141: Atu4141 - hypothetical protein, at 1,259,947 to 1,260,387 Atu4141 Atu4142: Atu4142 - proteinase, at 1,260,446 to 1,261,006 Atu4142 Atu4143: Atu4143 - hypothetical protein, at 1,261,025 to 1,261,246 Atu4143 Atu4144: Atu4144 - hypothetical protein, at 1,261,290 to 1,261,481 Atu4144
Group Condition Atu4140 Atu4141 Atu4142 Atu4143 Atu4144
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.4 -0.4 -0.4 -4.7
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.2 +0.2 -0.2 -4.9
stress Chloramphenicol 12.5 ug/mL +0.0 -0.5 +0.4 -0.6 -3.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.1 -0.0 -0.2 -3.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.1 +0.1 +0.1 -3.7
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.0 -0.4 +0.0 -2.7
Atjh14 +0.1 -0.4 +0.5 -0.2 -2.7
phage AgroPhage_F03 +0.0 -0.1 +0.3 +0.4 -3.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 -0.3 -0.3 -1.8
Atjh2 -0.1 +0.1 +0.2 -0.2 -2.2
phage Phage 97.3 + bacteria -0.1 +0.1 -0.0 +0.2 -2.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.3 +0.1 -0.6 -1.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.0 +0.0 +0.5 -1.9
phage AgroPhage_E04 -0.4 +0.1 +0.2 +0.1 -1.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.5 -0.3 -0.9 +1.2
phage AgroPhage_D10 -0.5 -0.6 -0.5 +0.2 +0.9
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.3 -0.5 -0.5 +0.1 +0.9
phage AgroPhage_C10 +0.2 -0.2 +0.0 +0.9 -1.0
phage AgroPhage_C04 +0.2 +0.4 -0.3 +0.6 -1.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.2 +0.1 +0.2 -1.3
carbon source Rhamnogalacturonan - from potato (C) +0.1 +0.4 +0.2 +0.8 -1.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 +0.0 -0.9 +1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -0.4 -0.5 +1.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.6 -0.1 -0.1 +1.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.1 +0.2 +1.2 -0.8
nitrogen source DL-2-Aminobutyric (N) +0.5 -0.3 -0.0 +2.0 -1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.4 +0.3 +0.7 +1.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.3 +0.1 -0.3 +1.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.2 -0.0 +0.1 +2.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.2 +0.6 +0.4 -0.4 +1.9
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