Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4131 and Atu4132 are separated by 118 nucleotidesAtu4132 and Atu4133 are separated by 31 nucleotidesAtu4133 and Atu4134 are separated by 125 nucleotidesAtu4134 and Atu4135 are separated by 95 nucleotides Atu4131: Atu4131 - hydroxybutyrate dehydrogenase, at 1,250,889 to 1,251,674 Atu4131 Atu4132: Atu4132 - AraC family transcriptional regulator, at 1,251,793 to 1,252,836 Atu4132 Atu4133: Atu4133 - hypothetical protein, at 1,252,868 to 1,253,164 Atu4133 Atu4134: Atu4134 - hypothetical protein, at 1,253,290 to 1,253,697 Atu4134 Atu4135: Atu4135 - glucose dehydrogenase, at 1,253,793 to 1,256,129 Atu4135
Group Condition Atu4131 Atu4132 Atu4133 Atu4134 Atu4135
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -1.2 -0.0 -0.3
phage AgroPhage_D10 +0.1 -0.2 -1.0 -0.5 -0.3
phage AgroPhage_C10 -0.4 +0.2 -1.4 -0.1 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 -1.3 -0.1 +0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.0 -1.8 +0.5 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 -1.2 -0.3 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.3 -0.5 +0.1 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.2 +0.3 -1.3 +0.3 -0.2
lb_arabidopsis_root LB_Arabidopsis_root +0.1 +0.4 -1.3 -0.0 -0.0
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 -0.4 -0.8 -0.2 +0.1
phage AgroPhage_C04 +0.5 +0.3 -1.3 -0.3 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.3 -0.9 -0.2 +0.1
phage AgroPhage_F03 +0.1 +0.6 -0.3 -0.6 -0.2
phage AgroPhage_F04 +0.2 +0.6 -0.7 -0.2 -0.3
nophagecontrol No phage control -0.3 +0.6 -0.7 +0.1 -0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.5 -0.6 +0.7 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.4 -0.8 +0.5 -0.2
nitrogen source DL-2-Aminobutyric (N) -0.3 +0.5 +0.4 -0.6 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.9 +0.2 -0.8 +0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.4 -0.4 +1.4 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.3 -0.4 +1.5 +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.6 +0.7 -0.1 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.8 -0.4 +0.4 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +1.0 -0.1 +0.2 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.3 +1.4 -0.1 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.4 +0.3 +1.2 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.2 +0.9 +0.8 -0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.6 +0.9 +0.2 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +1.0 +1.0 -0.1 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +1.1 +0.9 -0.4 +0.0
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