Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4124 and Atu4125 are separated by 1 nucleotidesAtu4125 and Atu4126 are separated by 2 nucleotidesAtu4126 and Atu4127 are separated by 1 nucleotidesAtu4127 and Atu4128 are separated by 74 nucleotides Atu4124: Atu4124 - branched chain amino acid ABC transporter ATPase, at 1,242,956 to 1,243,762 Atu4124 Atu4125: Atu4125 - branched chain amino acid ABC transporter ATPase, at 1,243,764 to 1,244,465 Atu4125 Atu4126: Atu4126 - branched chain amino acid ABC transporter permease, at 1,244,468 to 1,245,355 Atu4126 Atu4127: Atu4127 - branched chain amino acid ABC transporter permease, at 1,245,357 to 1,246,364 Atu4127 Atu4128: Atu4128 - GMC type oxidoreductase, at 1,246,439 to 1,248,034 Atu4128
Group Condition Atu4124 Atu4125 Atu4126 Atu4127 Atu4128
carbon source L-Sorbose (C) -0.1 -0.1 +0.1 +0.0 -3.7
carbon source L-Sorbose (C) -0.0 +0.0 +0.0 -0.0 -3.4
carbon source D-Saccharic potassium salt (C) -0.1 +0.7 +0.0 +0.1 -3.0
carbon source D-Saccharic potassium salt (C) -0.0 +0.4 +0.3 +0.5 -3.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.1 +0.0 -1.1 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.5 -0.4 -0.5 +0.0
carbon source NAG (C) +0.1 -0.2 -0.1 -0.1 -1.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.2 -0.2 -0.4 -0.6
carbon source NAG (C) -0.1 -0.1 -0.0 -0.1 -1.3
lb_tomato_leaf LB_Tomato_Leaf -0.3 -0.6 -0.1 -0.4 -0.2
carbon source L-(+)-Erythrulose (C) -0.1 -0.1 -0.2 -0.1 -1.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.3 -0.0 -0.6 -0.3
carbon source methyl-alpha-D-xylopyranoside (C) +0.1 -0.1 -0.1 -0.1 -1.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.3 -0.1 -0.2 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.2 +0.4 -0.2 -0.4
phage AgroPhage_E10 -0.8 +0.0 +0.4 -0.3 -0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.1 -0.4 +0.4 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 +0.4 -0.1 +0.1 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.2 -0.2 -0.3 -0.5
stress R2A with Neomycin 0.002 mM -0.3 -0.4 -0.0 -0.5 +0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.5 +0.1 -0.3 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.4 +0.1 +0.6 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +0.1 -0.1 -0.3 -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 -0.4 -0.1 +0.2 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.6 +0.3 +0.0 +0.5
nitrogen source DL-2-Aminobutyric (N) +0.4 +0.2 +0.6 +0.1 -0.1
carbon source L-Xylose (C) +0.1 -0.1 +0.0 +0.0 +1.4
carbon source L-Alanine (C) -0.0 +0.2 -0.0 +0.2 +1.2
carbon source L-Xylose (C) -0.1 +0.0 +0.0 +0.1 +1.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 +0.2 +0.4 +0.2
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