Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4108 and Atu4109 are separated by 70 nucleotidesAtu4109 and Atu4110 are separated by 13 nucleotidesAtu4110 and Atu4111 are separated by 54 nucleotidesAtu4111 and Atu4112 are separated by 224 nucleotides Atu4108: Atu4108 - ribonuclease D, at 1,228,027 to 1,228,653 Atu4108 Atu4109: Atu4109 - hypothetical protein, at 1,228,724 to 1,229,413 Atu4109 Atu4110: Atu4110 - serine dehydrogenase, at 1,229,427 to 1,230,176 Atu4110 Atu4111: Atu4111 - hypothetical protein, at 1,230,231 to 1,230,494 Atu4111 Atu4112: Atu4112 - proline dipeptidase, at 1,230,719 to 1,231,906 Atu4112
Group Condition Atu4108 Atu4109 Atu4110 Atu4111 Atu4112
carbon source DL-glyceraldehyde (C) +0.0 -1.2 -4.4 N.D. +0.2
carbon source DL-glyceraldehyde (C) +0.1 -0.4 -4.3 N.D. +0.1
stress R2A with Cadmium chloride hemipentahydrate 0.02 mM -2.7 -0.0 -0.2 N.D. -0.1
stress R2A with EDTA 0.25 mM -2.4 +0.2 -0.1 N.D. -0.0
stress R2A with m-arsenite 0.8 mM -0.6 +0.0 -0.2 N.D. -1.4
stress R2A with beryllium sulfate tetrahydrate 0.2 mM -1.8 -0.3 -0.0 N.D. -0.0
stress R2A with m-arsenite 0.8 mM -0.7 +0.0 -0.1 N.D. -1.4
stress R2A with Cadmium chloride hemipentahydrate 0.02 mM -2.0 -0.0 -0.1 N.D. +0.1
stress R2A with EDTA 0.25 mM -2.1 +0.2 +0.0 N.D. -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.2 -0.3 N.D. -1.5
stress R2A with Calcium Chloride Dihydrate 87.5 mM -1.7 +0.2 -0.1 N.D. -0.1
stress R2A with Calcium Chloride Dihydrate 87.5 mM -1.7 -0.2 -0.0 N.D. +0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 -0.7 -0.2 N.D. -0.4
stress R2A with beryllium sulfate tetrahydrate 0.2 mM -1.5 -0.0 -0.2 N.D. -0.0
stress R2A with Ceftazidime 4 mM -1.7 -0.2 -0.0 N.D. +0.3
stress R2A with Vancomycin 0.009 mM -1.1 -0.5 -0.1 N.D. +0.0
stress R2A with Strontium chloride 750 mM -1.4 +0.1 -0.1 N.D. -0.2
stress R2A with Strontium chloride 750 mM -1.4 -0.1 -0.1 N.D. -0.0
stress R2A with Bacitracin 0.6 mM -1.5 -0.2 -0.1 N.D. +0.2
stress R2A with Tetracycline 0.002 mM -0.8 -0.3 -0.1 N.D. -0.3
stress R2A with Ceftazidime 4 mM -1.6 -0.0 -0.1 N.D. +0.2
stress R2A with Nitrofurantoin 0.4 mg/mL -1.4 +0.2 -0.1 N.D. +0.1
stress R2A with Chloride 700 mM -1.3 -0.0 +0.0 N.D. +0.2
stress R2A with Spectinomycin 0.002 mM -1.3 +0.2 -0.2 N.D. +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.3 +0.3 N.D. -0.9
carbon source m-Inositol (C) -0.9 -0.3 +0.2 N.D. +0.2
carbon source NAG (C) -1.1 +0.1 +0.1 N.D. +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.4 +0.3 N.D. -0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.2 -0.4 N.D. -0.5
stress R2A with Polymyxin B sulfate 0.00075 mM -0.8 +0.3 +0.2 N.D. +0.4
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