Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4102 and Atu8037 are separated by 152 nucleotidesAtu8037 and Atu4103 are separated by 226 nucleotidesAtu4103 and Atu4104 are separated by 169 nucleotidesAtu4104 and Atu4105 are separated by 99 nucleotides Atu4102: Atu4102 - tRNA-Ala, at 1,221,110 to 1,221,185 Atu4102 Atu8037: Atu8037 - hypothetical protein, at 1,221,338 to 1,221,727 Atu8037 Atu4103: Atu4103 - cytidylate kinase, at 1,221,954 to 1,222,586 Atu4103 Atu4104: Atu4104 - 30S ribosomal protein S1, at 1,222,756 to 1,224,456 Atu4104 Atu4105: Atu4105 - hypothetical protein, at 1,224,556 to 1,226,097 Atu4105
Group Condition Atu4102 Atu8037 Atu4103 Atu4104 Atu4105
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days N.D. N.D. N.D. N.D. -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.4
phage AgroPhage_H10 N.D. N.D. N.D. N.D. -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.4
lb_sorghum f72 f505 LB_Sorghum F72 F505 N.D. N.D. N.D. N.D. -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.4
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. -0.4
phage AgroPhage_F04 N.D. N.D. N.D. N.D. -0.4
phage AgroPhage_H04 N.D. N.D. N.D. N.D. -0.4
phage AgroPhage_A01 N.D. N.D. N.D. N.D. -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. N.D. -0.3
phage AgroPhage_B07 N.D. N.D. N.D. N.D. -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. N.D. N.D. N.D. -0.3
carbon source D-Raffinose (C) N.D. N.D. N.D. N.D. -0.3
phage AgroPhage_C10 N.D. N.D. N.D. N.D. -0.3
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days N.D. N.D. N.D. N.D. -0.3
phage AgroPhage_F03 N.D. N.D. N.D. N.D. -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. N.D. -0.3
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. N.D. -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.3
carbon source D-Quinic (C) N.D. N.D. N.D. N.D. +0.3
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. +0.3
pH R2A pH 5.5 N.D. N.D. N.D. N.D. +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. +0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. +0.3
phage phage 99.2 N.D. N.D. N.D. N.D. +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. N.D. +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. N.D. +0.5
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