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Cofit
Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu8036 and Atu4093 are separated by 75 nucleotides
Atu4093 and Atu4094 are separated by 22 nucleotides
Atu4094 and Atu4095 are separated by 12 nucleotides
Atu4095 and Atu4096 are separated by 145 nucleotides
Atu8036: Atu8036 - protein YBGT-like protein, at 1,214,271 to 1,214,393
Atu8036
Atu4093: Atu4093 - hypothetical protein, at 1,214,469 to 1,214,657
Atu4093
Atu4094: Atu4094 - hypothetical protein, at 1,214,680 to 1,215,099
Atu4094
Atu4095: Atu4095 - hypothetical protein, at 1,215,112 to 1,215,363
Atu4095
Atu4096: Atu4096 - nicotinate-nucleotide pyrophosphorylase, at 1,215,509 to 1,216,366
Atu4096
Group
Condition
Atu8036
Atu4093
Atu4094
Atu4095
Atu4096
nitrogen source
L-Cysteine (N)
-6.3
-0.1
+0.2
+0.3
-1.4
nitrogen source
L-Cysteine (N)
-4.6
+0.2
+0.4
+0.1
-1.5
carbon source
m-Inositol (C)
+0.4
-0.0
-0.3
+0.2
-5.5
carbon source
Protocatechuic Acid (C)
-0.1
-0.0
+0.4
-0.0
-5.4
carbon source
m-Inositol (C)
+0.2
+0.3
-0.0
+0.2
-5.7
carbon source
D-Quinic (C)
+0.2
+0.2
+0.0
+0.1
-5.3
carbon source
D-Glucuronic gamma lactone (C)
+0.2
-0.0
+0.1
+0.5
-4.9
carbon source
Protocatechuic Acid (C)
-0.2
-0.2
+0.1
+0.1
-4.0
carbon source
D-Quinic (C)
-0.1
+0.2
-0.1
+0.5
-4.7
carbon source
D-Mannitol (C)
+0.1
-0.1
-0.2
-0.1
-3.7
carbon source
D-Maltose (C)
+0.5
+0.1
-0.0
-0.2
-4.4
carbon source
D-Galacturonic Acid (C)
+0.0
+0.1
+0.1
+0.3
-4.3
carbon source
L-Arabinose (C)
-0.1
-0.2
+0.2
+0.2
-3.8
carbon source
Ribitol (C)
+0.0
-0.2
+0.0
+0.2
-3.7
carbon source
D-Glucuronic gamma lactone (C)
+0.3
-0.1
+0.1
-0.0
-4.0
carbon source
L-Arabinose (C)
+0.0
+0.0
+0.2
-0.1
-3.8
carbon source
L-Fucose (C)
+0.1
-0.2
+0.1
+0.3
-3.9
carbon source
succinate (C)
+0.4
+0.1
-0.2
-0.4
-3.3
carbon source
D-Galacturonic Acid (C)
+0.1
+0.4
+0.3
+0.4
-4.6
carbon source
Sucrose (C)
+0.3
-0.1
+0.3
+0.2
-3.5
carbon source
Ribitol (C)
+0.2
+0.3
-0.1
+0.5
-3.7
carbon source
Xylobiose (C)
+0.4
-0.0
-0.1
+0.3
-3.3
carbon source
D-Fructose (C)
+0.4
+0.0
-0.1
+0.6
-3.5
carbon source
Xylobiose (C)
+0.1
-0.3
+0.3
+0.5
-3.1
carbon source
Stachyose (C)
+0.1
+0.2
-0.2
+0.5
-3.1
carbon source
D-Trehalose (C)
+0.5
+0.1
+0.1
+0.3
-3.3
carbon source
D-Fructose (C)
+0.1
+0.5
+0.5
+0.1
-3.1
carbon source
D-Raffinose (C)
+0.3
+0.4
+0.1
+0.6
-3.1
carbon source
NAG (C)
-0.2
+0.5
+0.3
+0.6
-2.9
carbon source
Rhamnogalacturonan - from potato (C)
+0.6
+0.8
+0.1
+0.2
-3.3
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