Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu4083	Atu4085	Atu4086	Atu4087	Atu4088
carbon source	L-ascorbate (C)	+0.2	-5.5	-6.4	-6.0	+0.2
carbon source	L-ascorbate (C)	+0.4	-2.1	-4.6	-5.2	+0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.8	-0.6	-0.2	-0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.8	-0.8	-0.4	+0.3	-0.4
phage	AgroPhage_D10	-0.2	-0.3	-0.8	-0.3	-0.1
carbon source	L-Sorbose (C)	-1.3	-0.1	-0.0	-0.0	-0.2
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.1	-0.5	-0.4	+0.1	-0.7
stress	R2A with m-arsenite 0.8 mM	-1.1	-0.2	-0.2	-0.0	+0.0
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	-0.4	-0.4	+0.4	-0.9
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.5	-0.2	+0.0	-0.6
lb_tobacco_leaf	LB_Tobacco_Leaf	-0.1	-0.4	-0.4	+0.1	-0.6
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.3	-0.2	+0.0	-1.0
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	+0.0	-0.6	-0.4	+0.1	-0.6
carbon source	L-Sorbose (C)	-1.3	-0.0	-0.0	+0.0	-0.1
phage	AgroPhage_H04	-0.2	-0.3	-0.3	+0.1	-0.5
nophagecontrol	No phage control	-0.4	-0.4	-0.2	+0.2	-0.4
phage	AgroPhage_B07	-0.4	-0.3	+0.1	+0.2	-0.5
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.2	-0.3	-0.2	+0.3
stress	R2A with m-arsenite 0.8 mM	-1.2	-0.0	+0.0	+0.2	+0.2
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	-0.4	-0.4	-0.2	+0.1
nitrogen source	L-Cysteine (N)	-0.0	+0.0	+0.2	+0.1	-1.1
phage	AgroPhage_E10	-0.3	-0.4	+0.5	-0.3	-0.3
nitrogen source	L-Cysteine (N)	+0.1	+0.1	+0.1	+0.2	-1.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.4	-0.1	+0.3	+0.1
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.1	-0.4	+0.2	-0.4
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	-0.1	+0.2	+0.4	-0.6
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.0	-0.6	+0.5	+0.4	-0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.2	+0.5	-0.1	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4	+0.4	-0.0	+0.0	+1.0
phage	phage 100.2	+0.6	+0.3	+0.3	+0.6	+0.1