Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4050 and Atu4051 are separated by 84 nucleotidesAtu4051 and Atu4052 overlap by 1 nucleotidesAtu4052 and Atu4053 overlap by 4 nucleotidesAtu4053 and Atu4054 are separated by 17 nucleotides Atu4050: Atu4050 - UTP-glucose-1-phosphate uridylyltransferase, at 1,167,226 to 1,168,131 Atu4050 Atu4051: Atu4051 - succinoglycan biosynthesis glycosyltransferase, at 1,168,216 to 1,169,196 Atu4051 Atu4052: Atu4052 - UDP-hexose transferase, at 1,169,196 to 1,170,140 Atu4052 Atu4053: Atu4053 - succinoglycan biosynthesis protein, at 1,170,137 to 1,171,135 Atu4053 Atu4054: Atu4054 - succinoglycan biosynthesis protein, at 1,171,153 to 1,172,334 Atu4054
Group Condition Atu4050 Atu4051 Atu4052 Atu4053 Atu4054
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 N.D. N.D. -4.3 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.4 N.D. N.D. -2.0 N.D.
phage AgroPhage_C04 -1.1 N.D. N.D. -2.3 N.D.
phage Phage 95.3 + bacteria -0.3 N.D. N.D. -2.9 N.D.
stress R2A with copper (II) chloride 0.04 mM -0.7 N.D. N.D. -2.2 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 N.D. N.D. -2.3 N.D.
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 N.D. N.D. -2.6 N.D.
phage AgroPhage_D04 -0.6 N.D. N.D. -2.0 N.D.
no phage P4L5 -0.9 N.D. N.D. -1.6 N.D.
in planta Bethi_Library_OD0.01 -0.8 N.D. N.D. -1.6 N.D.
carbon source D-Saccharic potassium salt (C) -0.6 N.D. N.D. -1.7 N.D.
nophagecontrol No phage control -0.3 N.D. N.D. -1.9 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 N.D. N.D. -1.8 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 N.D. N.D. -1.1 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 N.D. N.D. -1.5 N.D.
lb LB -0.1 N.D. N.D. -1.8 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.3 N.D. N.D. -1.6 N.D.
Atjh14 -1.9 N.D. N.D. +0.3 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.5 N.D. N.D. +0.5 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. -1.4 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.4 N.D. N.D. +0.6 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 N.D. N.D. +0.9 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 N.D. N.D. +0.9 N.D.
Atjh2 -1.1 N.D. N.D. +1.5 N.D.
stress Timentin 6.25 ug/mL +0.5 N.D. N.D. +1.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 N.D. N.D. +1.6 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. N.D. +1.9 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.2 N.D. N.D. +0.9 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 N.D. N.D. +2.5 N.D.
stress R2A with m-arsenite 0.8 mM +1.4 N.D. N.D. +1.0 N.D.
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