Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu4034 and Atu4035 are separated by 1 nucleotidesAtu4035 and Atu4036 are separated by 107 nucleotidesAtu4036 and Atu4037 are separated by 87 nucleotidesAtu4037 and Atu4038 overlap by 143 nucleotides Atu4034: Atu4034 - two component sensor kinase, at 1,149,178 to 1,150,413 Atu4034 Atu4035: Atu4035 - two component response regulator, at 1,150,415 to 1,151,137 Atu4035 Atu4036: Atu4036 - DNA topoisomerase, at 1,151,245 to 1,152,261 Atu4036 Atu4037: Atu4037 - glucose dehydrogenase, at 1,152,349 to 1,153,578 Atu4037 Atu4038: Atu4038 - hypothetical protein, at 1,153,436 to 1,153,651 Atu4038
Group Condition Atu4034 Atu4035 Atu4036 Atu4037 Atu4038
carbon source Xylitol (C) -1.4 -1.5 -0.0 +0.1 N.D.
carbon source D-Glucuronic gamma lactone (C) -1.5 -1.2 -0.0 -0.1 N.D.
carbon source D-Glucuronic gamma lactone (C) -1.3 -1.0 +0.1 +0.1 N.D.
carbon source Xylitol (C) -1.2 -1.1 +0.0 +0.1 N.D.
carbon source L-ascorbate (C) -0.9 -0.8 -0.1 +0.2 N.D.
stress Chloramphenicol 12.5 ug/mL +0.1 -0.2 -0.5 -0.7 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.8 -0.4 -0.2 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.7 +0.1 -0.3 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.8 +0.4 +0.2 -0.3 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.5 +0.4 -0.1 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 +0.4 -0.3 +0.2 N.D.
carbon source D-Arabinose (C) +0.7 +0.8 -0.1 -0.0 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +1.0 +0.3 -0.1 N.D.
carbon source L-Xylose (C) +0.8 +0.8 +0.0 -0.1 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.5 -0.1 +0.2 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.8 +0.5 +0.1 +0.1 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.9 +0.6 +0.0 +0.1 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +0.7 +0.2 +0.1 N.D.
carbon source D-Arabinose (C) +1.0 +0.7 +0.0 -0.0 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +1.0 +0.9 +0.0 -0.1 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +1.0 +0.1 +0.1 N.D.
carbon source L-Xylose (C) +1.0 +0.9 -0.0 +0.1 N.D.
carbon source D-Galacturonic Acid (C) +1.0 +1.0 -0.1 +0.1 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.9 +0.8 +0.1 +0.2 N.D.
stress R2A with m-arsenite 0.8 mM +1.2 +1.2 -0.2 -0.1 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +1.0 +0.1 +0.7 N.D.
carbon source D-Galacturonic Acid (C) +1.1 +1.2 +0.0 +0.1 N.D.
carbon source L-Fucose (C) +1.5 +1.7 -0.1 -0.0 N.D.
carbon source L-Fucose (C) +1.5 +1.6 -0.2 +0.1 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +1.3 +1.2 +0.4 +0.2 N.D.
remove
Atu4034
plot		 remove
Atu4035
plot		 remove
Atu4036		 remove
Atu4037
plot		 remove
Atu4038
plot