Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4033 and Atu8035 are separated by 43 nucleotidesAtu8035 and Atu4034 are separated by 94 nucleotidesAtu4034 and Atu4035 are separated by 1 nucleotidesAtu4035 and Atu4036 are separated by 107 nucleotides Atu4033: Atu4033 - sugar ABC transporter substrate-binding protein, at 1,147,853 to 1,148,869 Atu4033 Atu8035: Atu8035 - hypothetical protein, at 1,148,913 to 1,149,083 Atu8035 Atu4034: Atu4034 - two component sensor kinase, at 1,149,178 to 1,150,413 Atu4034 Atu4035: Atu4035 - two component response regulator, at 1,150,415 to 1,151,137 Atu4035 Atu4036: Atu4036 - DNA topoisomerase, at 1,151,245 to 1,152,261 Atu4036
Group Condition Atu4033 Atu8035 Atu4034 Atu4035 Atu4036
carbon source D-Glucuronic gamma lactone (C) -1.3 -0.8 -1.4 -1.2 -0.0
carbon source D-Glucuronic gamma lactone (C) -1.4 -0.8 -1.3 -1.0 +0.1
carbon source Xylitol (C) -1.6 +0.8 -1.4 -1.5 -0.0
carbon source L-ascorbate (C) -1.1 -0.6 -0.9 -0.8 -0.1
carbon source Xylitol (C) -1.2 +0.4 -1.2 -1.1 +0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -1.9 +0.5 -0.0 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -2.1 +0.2 +0.5 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -1.5 +0.6 +1.0 +0.1
phage AgroPhage_E10 +0.2 +1.4 +0.2 +0.4 -0.6
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +1.3 +0.6 +0.6 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +1.5 +0.3 +0.9 -0.1
carbon source L-Xylose (C) +0.7 +0.5 +0.8 +0.8 +0.0
carbon source D-Arabinose (C) +0.6 +0.5 +1.0 +0.7 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +0.6 +0.2 +1.0 +0.3
carbon source D-Arabinose (C) +0.7 +0.8 +0.7 +0.8 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.8 +0.8 +0.5 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +1.9 +0.3 +0.3 -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +1.1 +0.6 +0.7 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.7 +0.9 +0.6 +0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +1.0 +0.8 +0.4 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 +0.5 +0.6 +1.0 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +1.0 +0.7 +0.7 +0.2
carbon source L-Xylose (C) +0.8 +0.6 +1.0 +0.9 -0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.8 +0.6 +1.0 +0.9 +0.0
carbon source D-Galacturonic Acid (C) +1.0 +1.0 +1.0 +1.0 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +1.1 +0.1 +1.3 +1.2 +0.4
carbon source D-Galacturonic Acid (C) +1.2 +0.7 +1.1 +1.2 +0.0
carbon source L-Fucose (C) +1.5 +1.2 +1.5 +1.6 -0.2
stress R2A with m-arsenite 0.8 mM +1.3 +2.1 +1.2 +1.2 -0.2
carbon source L-Fucose (C) +1.4 +1.3 +1.5 +1.7 -0.1
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