Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4028 and Atu4029 are separated by 151 nucleotidesAtu4029 and Atu4030 are separated by 34 nucleotidesAtu4030 and Atu4031 overlap by 4 nucleotidesAtu4031 and Atu4032 overlap by 4 nucleotides Atu4028: Atu4028 - recombination regulator RecX, at 1,142,789 to 1,143,298 Atu4028 Atu4029: Atu4029 - gluconolactonase, at 1,143,450 to 1,144,370 Atu4029 Atu4030: Atu4030 - sugar ABC transporter permease, at 1,144,405 to 1,145,352 Atu4030 Atu4031: Atu4031 - sugar ABC transporter permease, at 1,145,349 to 1,146,290 Atu4031 Atu4032: Atu4032 - sugar ABC transporter ATPase, at 1,146,287 to 1,147,750 Atu4032
Group Condition Atu4028 Atu4029 Atu4030 Atu4031 Atu4032
carbon source D-Glucuronic gamma lactone (C) -0.2 -2.1 -1.4 -1.7 -1.7
carbon source D-Glucuronic gamma lactone (C) +0.5 -2.3 -1.4 -1.4 -1.6
carbon source L-ascorbate (C) +0.3 -0.9 -1.2 -0.9 -1.0
carbon source D-Ribose (C) +0.2 -0.3 -0.8 -1.0 -0.8
carbon source D-Ribose (C) -0.2 -0.0 -0.6 -0.9 -0.7
carbon source NAG (C) -0.4 -1.0 -0.3 -0.2 -0.4
carbon source L-ascorbate (C) +0.3 -0.8 -0.4 -0.4 -0.4
carbon source Xylitol (C) +0.0 +3.6 -1.7 -1.6 -1.6
carbon source Xylitol (C) -0.2 +4.2 -1.7 -1.7 -1.9
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -0.7 -0.2 +0.8 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -1.1 +0.4 +0.3 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -1.0 +0.3 +0.3 +0.5
carbon source L-Xylose (C) +0.1 -1.4 +0.5 +0.2 +0.3
carbon source L-Xylose (C) -0.1 -1.5 +0.6 +0.3 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.0 -1.1 +0.2 +0.3 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -1.0 +0.5 +0.0 +0.4
stress R2A with m-arsenite 0.8 mM -0.4 -0.8 +0.8 +0.4 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -1.4 +0.9 +0.6 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -1.1 +0.5 +0.5 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.1 -1.4 +0.1 +0.7 +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.7 +0.4 +0.1 +0.6 +0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 +0.7 +0.4 +0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 -0.0 -0.4 +0.4 +0.7
carbon source D-Galacturonic Acid (C) +0.2 -0.5 +0.7 +0.5 +0.7
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.0 +0.3 +0.9 +0.8
stress R2A with m-arsenite 0.8 mM -0.2 -1.6 +1.3 +1.3 +1.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.4 +0.8 +1.0 +0.7
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.7 +1.1 +1.2 +1.0
carbon source L-Fucose (C) -0.0 +0.0 +1.3 +1.3 +1.4
carbon source L-Fucose (C) +0.1 -0.1 +1.3 +1.3 +1.5
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