Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4019 and Atu4020 are separated by 66 nucleotidesAtu4020 and Atu4021 are separated by 709 nucleotidesAtu4021 and Atu4022 are separated by 187 nucleotidesAtu4022 and Atu4023 are separated by 49 nucleotides Atu4019: Atu4019 - two component response regulator, at 1,131,471 to 1,132,124 Atu4019 Atu4020: Atu4020 - hypothetical protein, at 1,132,191 to 1,133,837 Atu4020 Atu4021: Atu4021 - LysR family transcriptional regulator, at 1,134,547 to 1,135,458 Atu4021 Atu4022: Atu4022 - hydroxamate-type ferrisiderophore receptor, at 1,135,646 to 1,137,778 Atu4022 Atu4023: Atu4023 - ferrichrome ABC transporter substrate-binding protein, at 1,137,828 to 1,138,709 Atu4023
Group Condition Atu4019 Atu4020 Atu4021 Atu4022 Atu4023
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -4.1 -0.1 -0.1 +0.0 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.4 -1.2 -0.2 +0.0 -0.4
nitrogen source D-Alanine (N) -3.9 -0.3 -0.0 +0.2 +0.1
nitrogen source D-Alanine (N) -3.3 -0.3 -0.0 -0.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -2.9 -0.2 -0.2 +0.2 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -3.2 -0.1 -0.1 +0.1 -0.0
nitrogen source L-Leucine (N) -3.1 -0.1 -0.1 +0.0 +0.2
nitrogen source L-Leucine (N) -3.4 -0.1 +0.2 +0.0 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.9 -0.1 +0.1 +0.0 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.8 -0.5 -0.0 +0.1 +0.2
nitrogen source L-pyroglutamic (N) -2.9 +0.1 -0.1 +0.0 +0.2
carbon source L-ascorbate (C) -1.6 -1.2 +0.1 +0.0 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.3 +0.1 -0.8 -0.1 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.3 -0.7 -0.2 +0.3 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.1 -0.2 +0.1 -0.0 +0.1
nitrogen source L-pyroglutamic (N) -2.5 +0.1 +0.1 +0.1 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.9 -0.1 +0.2 +0.0 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.7 -0.1 -0.0 -0.1 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.8 -0.8 +0.4 +0.2 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.1 -0.6 -0.4 -0.1 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.5 -0.7 +0.0 +0.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -1.7 -0.3 +0.6 +0.0 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.7 -0.1 +0.1 +0.2 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.8 -0.5 +0.2 +0.2 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.5 -0.1 +0.2 +0.0 +0.2
nitrogen source D-Lysine (N) -1.6 +0.2 -0.1 +0.0 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.9 -0.3 +0.6 -0.0 +0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 -0.4 +0.6 +0.0 +0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.7 -0.3 +0.6 +0.2 +0.5
nitrogen source DL-2-Aminobutyric (N) -0.2 +0.7 +0.7 +0.2 -0.1
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