Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4017 and Atu4018 are separated by 54 nucleotidesAtu4018 and Atu4019 are separated by 21 nucleotidesAtu4019 and Atu4020 are separated by 66 nucleotidesAtu4020 and Atu4021 are separated by 709 nucleotides Atu4017: Atu4017 - MFS permease, at 1,128,726 to 1,130,057 Atu4017 Atu4018: Atu4018 - two component sensor kinase, at 1,130,112 to 1,131,449 Atu4018 Atu4019: Atu4019 - two component response regulator, at 1,131,471 to 1,132,124 Atu4019 Atu4020: Atu4020 - hypothetical protein, at 1,132,191 to 1,133,837 Atu4020 Atu4021: Atu4021 - LysR family transcriptional regulator, at 1,134,547 to 1,135,458 Atu4021
Group Condition Atu4017 Atu4018 Atu4019 Atu4020 Atu4021
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.0 -3.2 -4.1 -0.1 -0.1
nitrogen source L-Leucine (N) -0.3 -3.8 -3.1 -0.1 -0.1
nitrogen source L-Leucine (N) -0.3 -3.7 -3.4 -0.1 +0.2
nitrogen source D-Alanine (N) -0.2 -2.8 -3.9 -0.3 -0.0
nitrogen source D-Alanine (N) -0.3 -3.1 -3.3 -0.3 -0.0
nitrogen source L-pyroglutamic (N) -0.3 -3.1 -2.9 +0.1 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.1 -2.7 -3.1 -0.1 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -2.4 -2.4 -1.2 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.0 -2.5 -2.9 -0.2 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.1 -2.7 -2.9 -0.1 +0.1
nitrogen source L-pyroglutamic (N) -0.1 -2.5 -2.5 +0.1 +0.1
in planta Bethi_Library_OD0.01 +0.2 -2.5 -2.2 -0.1 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -1.5 -2.8 -0.5 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.1 -2.6 -1.7 -0.3 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -1.9 -1.9 -0.1 +0.2
nitrogen source Glycine (N) -0.3 -1.9 -1.6 -0.1 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.1 -1.7 -2.1 -0.2 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -1.8 -1.5 -0.7 +0.0
carbon source L-ascorbate (C) +0.1 -1.2 -1.6 -1.2 +0.1
in planta Bethi_Library_OD0.1 +0.1 -1.8 -1.9 -0.2 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -2.0 -1.9 -0.3 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -1.7 -1.7 -0.1 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -1.0 -1.3 -0.7 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.2 -2.0 -1.7 -0.0 +0.0
nitrogen source 5-Aminolevulinic (N) -0.2 -1.7 -1.6 -0.0 -0.1
in planta Bethi_Library_OD0.05 +0.2 -1.7 -2.1 +0.0 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -1.4 -1.8 -0.8 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -1.1 -1.8 -0.5 +0.2
nitrogen source D-Lysine (N) -0.2 -1.3 -1.6 +0.2 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.9 -1.7 -0.3 +0.6
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