Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4014 and Atu4015 are separated by 245 nucleotidesAtu4015 and Atu4017 are separated by 267 nucleotidesAtu4017 and Atu4018 are separated by 54 nucleotidesAtu4018 and Atu4019 are separated by 21 nucleotides Atu4014: Atu4014 - transcriptional regulator, at 1,126,867 to 1,127,097 Atu4014 Atu4015: Atu4015 - hypothetical protein, at 1,127,343 to 1,128,458 Atu4015 Atu4017: Atu4017 - MFS permease, at 1,128,726 to 1,130,057 Atu4017 Atu4018: Atu4018 - two component sensor kinase, at 1,130,112 to 1,131,449 Atu4018 Atu4019: Atu4019 - two component response regulator, at 1,131,471 to 1,132,124 Atu4019
Group Condition Atu4014 Atu4015 Atu4017 Atu4018 Atu4019
nitrogen source L-Leucine (N) N.D. -0.0 -0.3 -3.7 -3.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. -0.0 -0.0 -3.2 -4.1
nitrogen source L-Leucine (N) N.D. -0.0 -0.3 -3.8 -3.1
nitrogen source D-Alanine (N) N.D. -0.0 -0.2 -2.8 -3.9
nitrogen source D-Alanine (N) N.D. +0.1 -0.3 -3.1 -3.3
nitrogen source L-pyroglutamic (N) N.D. -0.0 -0.3 -3.1 -2.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. +0.0 -0.1 -2.7 -3.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. +0.0 +0.1 -2.7 -2.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. -0.0 +0.0 -2.5 -2.9
nitrogen source L-pyroglutamic (N) N.D. +0.1 -0.1 -2.5 -2.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 +0.2 -2.4 -2.4
in planta Bethi_Library_OD0.01 N.D. -0.1 +0.2 -2.5 -2.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. +0.1 -0.1 -2.6 -1.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 -0.1 -2.0 -1.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.1 -0.1 -1.9 -1.9
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.0 +0.4 -1.5 -2.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. -0.0 -0.1 -1.7 -2.1
in planta Bethi_Library_OD0.05 N.D. -0.1 +0.2 -1.7 -2.1
nitrogen source Glycine (N) N.D. +0.1 -0.3 -1.9 -1.6
in planta Bethi_Library_OD0.1 N.D. -0.1 +0.1 -1.8 -1.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.1 -0.1 -1.7 -1.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. +0.1 +0.2 -2.0 -1.7
nitrogen source 5-Aminolevulinic (N) N.D. +0.0 -0.2 -1.7 -1.6
nitrogen source D-Lysine (N) N.D. -0.3 -0.2 -1.3 -1.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 +0.1 -1.8 -1.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 +0.1 -1.1 -1.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. +0.0 -0.0 -1.5 -1.7
nitrogen source Glycine (N) N.D. +0.2 -0.1 -1.6 -1.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.1 +0.2 -1.4 -1.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. +0.1 -0.2 -1.4 -1.5
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