Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu4012	Atu4013	Atu4014	Atu4015	Atu4017
phage	AgroPhage_C10	-0.2	-0.5	N.D.	-0.3	-0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.3	N.D.	+0.0	-0.2
nitrogen source	L-Ornithine (N)	+0.0	-0.3	N.D.	-0.2	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	-0.4	N.D.	-0.2	+0.1
stress	R2A with Nitrofurantoin 0.4 mg/mL	-0.2	-0.8	N.D.	+0.0	-0.0
carbon source	a-Ketoglutaric (C)	-0.2	-0.1	N.D.	+0.1	-0.7
stress	R2A with Nitrofurantoin 0.4 mg/mL	-0.2	-0.8	N.D.	+0.1	-0.0
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	-0.1	N.D.	-0.6	-0.1
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	+0.4	N.D.	-0.3	-0.3
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.3	N.D.	+0.2	+0.3
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.3	+0.4	N.D.	-0.4	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.3	N.D.	-0.4	+0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.7	+0.2	N.D.	-0.2	-0.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	+0.1	N.D.	+0.2	-0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.3	+0.2	N.D.	+0.3	-0.1
nitrogen source	DL-2-Aminobutyric (N)	+0.7	-0.2	N.D.	+0.9	-0.7
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days	+0.6	+0.3	N.D.	+0.1	-0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.5	+0.1	N.D.	+0.3	-0.1
carbon source	Glutaric (C)	-0.1	+0.1	N.D.	+0.1	+0.8
phage	AgroPhage_A07	+0.3	+0.5	N.D.	+0.2	-0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.5	+0.3	N.D.	+0.2	-0.0
nophagecontrol	No phage control	+0.1	+0.4	N.D.	+0.3	+0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.0	+0.4	N.D.	+0.4	+0.3
carbon source	Glutaric (C)	+0.4	+0.0	N.D.	+0.0	+0.7
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.5	+0.3	N.D.	+0.2	+0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.9	+0.0	N.D.	+0.1	+0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.6	+0.5	N.D.	-0.1	+0.2
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.5	N.D.	+0.2	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.6	+0.4	N.D.	+0.1	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.2	+0.3	N.D.	-0.0	+0.2