Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3952 and Atu3953 are separated by 134 nucleotidesAtu3953 and Atu3954 are separated by 27 nucleotidesAtu3954 and Atu3955 overlap by 4 nucleotidesAtu3955 and Atu3956 are separated by 13 nucleotides Atu3952: Atu3952 - oxidoreductase, at 1,055,276 to 1,056,604 Atu3952 Atu3953: Atu3953 - hydroxyproline-2-epimerase, at 1,056,739 to 1,057,737 Atu3953 Atu3954: Atu3954 - ABC transporter permease, at 1,057,765 to 1,058,616 Atu3954 Atu3955: Atu3955 - ABC transporter permease, at 1,058,613 to 1,059,461 Atu3955 Atu3956: Atu3956 - ABC transporter permease, at 1,059,475 to 1,060,566 Atu3956
Group Condition Atu3952 Atu3953 Atu3954 Atu3955 Atu3956
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.6 -0.4 -0.1 -0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.2 -0.2 -0.4 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.5 +0.0 -0.2 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 -0.1 -0.4 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.3 +0.1 -0.5 +0.0
phage AgroPhage_E04 +0.2 -0.3 +0.1 -0.2 -0.6
lb_benthi_root LB_Benthi_root +0.2 +0.0 -0.4 -0.3 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.3 -0.3 +0.0 -0.6
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.5 -0.2 +0.3 -0.1
nitrogen source DL-2-Aminobutyric (N) -0.2 +0.6 -0.4 -0.3 -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 -0.2 +0.2 +0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.4 +0.1 +0.3 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 -0.1 -0.2 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.6 +0.2 +0.0 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 +0.3 -0.6 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 +0.1 -0.5 -0.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 -0.3 -0.1 -0.2 +0.0
nophagecontrol No phage control +0.3 -0.1 +0.2 -0.2 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -0.2 +0.4 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.6 -0.2 -0.0 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.6 +0.2 +0.2 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.4 -0.5 +0.1 -0.1 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 +0.3 -0.4 +0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.5 +0.1 +0.2 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.7 -0.2 -0.1 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.3 -0.1 +0.1 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.4 +0.1 +0.4 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.5 -0.0 +0.3 -0.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 +0.1 +0.2 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.0 +0.1 +0.5 +0.7
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