Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3950 and Atu3951 are separated by 2 nucleotidesAtu3951 and Atu3952 are separated by 185 nucleotidesAtu3952 and Atu3953 are separated by 134 nucleotidesAtu3953 and Atu3954 are separated by 27 nucleotides Atu3950: Atu3950 - aldehyde dehydrogenase, at 1,052,716 to 1,054,173 Atu3950 Atu3951: Atu3951 - LysR family transcriptional regulator, at 1,054,176 to 1,055,090 Atu3951 Atu3952: Atu3952 - oxidoreductase, at 1,055,276 to 1,056,604 Atu3952 Atu3953: Atu3953 - hydroxyproline-2-epimerase, at 1,056,739 to 1,057,737 Atu3953 Atu3954: Atu3954 - ABC transporter permease, at 1,057,765 to 1,058,616 Atu3954
Group Condition Atu3950 Atu3951 Atu3952 Atu3953 Atu3954
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.0 -0.0 -0.6 -0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 -0.2 -0.4 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.5 -0.1 +0.1 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 +0.2 -0.3 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.6 +0.2 -0.3 +0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.2 +0.1 -0.5 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.4 -0.0 +0.3 -0.3
phage AgroPhage_E10 -0.3 +0.2 -0.1 -0.5 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.0 +0.1 -0.6 +0.2
nitrogen source DL-2-Aminobutyric (N) -0.1 -0.3 -0.2 +0.6 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.4 -0.3 -0.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 -0.3 +0.1 -0.4 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 -0.2 +0.1 -0.4 +0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 -0.1 -0.6 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 +0.2 +0.1 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.4 -0.1 +0.3 -0.1 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.0 +0.2 -0.4 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 -0.0 -0.5 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.4 +0.1 +0.6 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.0 +0.3 -0.3 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 +0.1 +0.3 +0.1 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.1 +0.1 +0.4 -0.5 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.2 +0.3 -0.4 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 +0.1 +0.1 +0.7 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 +0.2 -0.2 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 +0.2 +0.4 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +0.1 +0.5 -0.3 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.4 +0.2 +0.2 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.2 +0.3 +0.3 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.2 +0.4 +0.5 -0.0
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