Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3947 and Atu3948 are separated by 299 nucleotidesAtu3948 and Atu3949 are separated by 10 nucleotidesAtu3949 and Atu3950 are separated by 17 nucleotidesAtu3950 and Atu3951 are separated by 2 nucleotides Atu3947: Atu3947 - oxidoreductase, at 1,048,988 to 1,050,298 Atu3947 Atu3948: Atu3948 - hypothetical protein, at 1,050,598 to 1,051,743 Atu3948 Atu3949: Atu3949 - ornithine cyclodeaminase, at 1,051,754 to 1,052,698 Atu3949 Atu3950: Atu3950 - aldehyde dehydrogenase, at 1,052,716 to 1,054,173 Atu3950 Atu3951: Atu3951 - LysR family transcriptional regulator, at 1,054,176 to 1,055,090 Atu3951
Group Condition Atu3947 Atu3948 Atu3949 Atu3950 Atu3951
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.1 -0.5 -0.1 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.0 -0.6 -0.2 -0.5
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.2 -0.5 -0.5 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.3 -0.0 -0.3 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.0 -0.1 -0.3 -0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.2 -0.5 -0.2 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.3 -0.3 -0.1 -0.1
phage AgroPhage_E10 -0.6 -0.1 -0.2 -0.3 +0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.0 -0.3 -0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 -0.4 -0.3 +0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.4 -0.0 -0.2 +0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 -0.6 -0.1 -0.1
Atjh10 -0.6 -0.4 +0.0 +0.4 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.1 -0.3 +0.2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -0.3 +0.1 +0.4 -0.2
Atjh14 -0.2 +0.0 -0.2 -0.3 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 -0.3 +0.2 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.2 -0.4 +0.5 -0.0
stress R2A with hypochlorite 6.25 mM -0.2 +0.2 -0.1 +0.3 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.6 +0.3 +0.2 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 -0.1 -0.2 +0.4
phage AgroPhage_D10 +0.3 -0.3 +0.0 -0.1 +0.4
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 -0.2 +0.3 -0.2 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 +0.4 +0.1 -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.2 +0.4 -0.2 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.2 -0.3 +0.4 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.1 +0.1 +0.3 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.2 -0.3 +0.1 +0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.8 +0.0 +0.1 -0.0 +0.2
Atjh2 -0.0 +0.3 +0.2 +0.2 +0.5
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