Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3933 and Atu3934 overlap by 4 nucleotidesAtu3934 and Atu3935 are separated by 113 nucleotidesAtu3935 and Atu3936 are separated by 22 nucleotidesAtu3936 and Atu3937 are separated by 563 nucleotides Atu3933: Atu3933 - histidine ammonia-lyase, at 1,036,224 to 1,037,768 Atu3933 Atu3934: Atu3934 - imidazolonepropionase, at 1,037,765 to 1,039,024 Atu3934 Atu3935: Atu3935 - N-formimino-L-glutamate deiminase, at 1,039,138 to 1,040,484 Atu3935 Atu3936: Atu3936 - GntR family transcriptional regulator, at 1,040,507 to 1,041,253 Atu3936 Atu3937: Atu3937 - 16S ribosomal RNA, at 1,041,817 to 1,043,296 Atu3937
Group Condition Atu3933 Atu3934 Atu3935 Atu3936 Atu3937
nitrogen source L-Histidine (N) -3.2 -3.4 -4.8 +1.5 N.D.
nitrogen source L-Histidine (N) -2.9 -2.9 -4.6 +1.6 N.D.
stress R2A with m-arsenite 0.8 mM -0.9 -0.3 +0.1 -0.3 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.1 -0.3 -0.7 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.0 -0.2 -0.8 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.3 -0.2 -0.3 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 -0.3 -0.3 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.3 -0.0 -0.4 N.D.
nophagecontrol No phage control -0.2 -0.0 -0.4 -0.3 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.5 -0.3 +0.1 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.2 -0.3 -0.4 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.2 -0.1 -0.4 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.2 +0.1 -0.6 N.D.
stress R2A with Vancomycin 0.009 mM -0.3 +0.3 -1.3 +0.4 N.D.
stress R2A with m-arsenite 0.8 mM -0.5 -0.3 +0.2 -0.2 N.D.
stress R2A with Vancomycin 0.009 mM -0.0 +0.2 -1.2 +0.3 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +0.0 -0.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 +0.0 -0.7 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 -0.1 -0.3 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 -0.4 -0.3 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.4 -0.0 -0.3 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.4 +0.3 +0.1 N.D.
stress R2A with Novobiocin 0.002 mM +0.3 +0.4 -0.3 -0.0 N.D.
phage AgroPhage_C04 +0.5 +0.3 +0.1 -0.1 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.3 +0.2 +0.4 N.D.
nitrogen source DL-2-Aminobutyric (N) +0.3 +0.0 -0.1 +0.7 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 +0.3 +0.1 +0.4 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 +0.4 +0.0 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 +0.2 +0.3 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 -0.0 +0.5 N.D.
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