Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3931 and Atu3932 are separated by 14 nucleotidesAtu3932 and Atu3933 are separated by 73 nucleotidesAtu3933 and Atu3934 overlap by 4 nucleotidesAtu3934 and Atu3935 are separated by 113 nucleotides Atu3931: Atu3931 - urocanate hydratase, at 1,033,662 to 1,035,335 Atu3931 Atu3932: Atu3932 - hypothetical protein, at 1,035,350 to 1,036,150 Atu3932 Atu3933: Atu3933 - histidine ammonia-lyase, at 1,036,224 to 1,037,768 Atu3933 Atu3934: Atu3934 - imidazolonepropionase, at 1,037,765 to 1,039,024 Atu3934 Atu3935: Atu3935 - N-formimino-L-glutamate deiminase, at 1,039,138 to 1,040,484 Atu3935
Group Condition Atu3931 Atu3932 Atu3933 Atu3934 Atu3935
nitrogen source L-Histidine (N) -2.1 -2.2 -3.2 -3.4 -4.8
nitrogen source L-Histidine (N) -1.9 -2.0 -2.9 -2.9 -4.6
stress R2A with m-arsenite 0.8 mM -0.3 -0.4 -0.9 -0.3 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.5 -0.3 -0.5 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.3 -0.1 -0.4 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.5 -0.1 -0.3 -0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.4 -0.1 -0.3 -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.7 -0.3 -0.2 -0.2 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.3 -0.3 -0.3 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.2 -0.3 -0.2 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.0 -0.2 -0.2 -0.3
stress R2A with m-arsenite 0.8 mM -0.3 -0.3 -0.5 -0.3 +0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.0 -0.3 -0.4 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 +0.1 +0.1 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.3 +0.4 -0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.3 -0.2 -0.3 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.0 -0.2 +0.3 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.1 +0.2 +0.4 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.4 -0.3 +0.2 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.3 +0.3 +0.4 -0.0
stress R2A with Vancomycin 0.009 mM +1.2 -0.1 -0.3 +0.3 -1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.5 +0.3 +0.3 +0.1
stress R2A with Vancomycin 0.009 mM +0.9 +0.1 -0.0 +0.2 -1.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 +0.2 +0.4 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 +0.4 -0.4 +0.3
stress R2A with Novobiocin 0.002 mM -0.2 +0.4 +0.3 +0.4 -0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 +0.2 +0.4 -0.0
phage AgroPhage_C04 +0.1 -0.2 +0.5 +0.3 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.4 +0.2 +0.3 +0.2
phage Phage 100.2 + bactiera +0.2 +0.1 +0.2 +0.3 +0.4
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