Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3918 and Atu3919 are separated by 55 nucleotidesAtu3919 and Atu3920 are separated by 96 nucleotidesAtu3920 and Atu3921 are separated by 45 nucleotidesAtu3921 and Atu3922 are separated by 145 nucleotides Atu3918: Atu3918 - hypothetical protein, at 1,020,642 to 1,021,841 Atu3918 Atu3919: Atu3919 - hypothetical protein, at 1,021,897 to 1,022,181 Atu3919 Atu3920: Atu3920 - hypothetical protein, at 1,022,278 to 1,022,538 Atu3920 Atu3921: Atu3921 - hypothetical protein, at 1,022,584 to 1,022,742 Atu3921 Atu3922: Atu3922 - replication initiation protein RepC, at 1,022,888 to 1,024,165 Atu3922
Group Condition Atu3918 Atu3919 Atu3920 Atu3921 Atu3922
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.3 -1.1 N.D. N.D.
stress R2A with Manganese (II) chloride tetrahydrate 5 mM -0.3 -0.3 -0.4 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.4 -0.5 N.D. N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.6 -0.3 N.D. N.D.
nitrogen source DL-2-Aminobutyric (N) -0.1 -0.3 -0.5 N.D. N.D.
phage AgroPhage_F04 -0.3 -0.7 +0.0 N.D. N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 -0.6 N.D. N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.4 -0.3 N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 -0.5 N.D. N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 +0.2 -0.6 N.D. N.D.
stress R2A with Zinc chloride 0.05 mM -0.2 -0.3 +0.4 N.D. N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.0 +0.4 N.D. N.D.
phage AgroPhage_E10 -0.1 -0.3 +0.6 N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.4 -0.3 N.D. N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.7 -0.2 N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.8 -0.3 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 +0.7 -0.2 N.D. N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 +0.5 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 +0.6 N.D. N.D.
nophagecontrol No phage control +0.1 -0.2 +0.6 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +0.4 +0.4 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.4 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 +0.4 N.D. N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.5 +0.3 N.D. N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.3 +0.4 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 +0.9 N.D. N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.1 +1.1 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.5 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.2 +0.8 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.2 +0.2 +0.6 N.D. N.D.
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