Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3909 and Atu3910 are separated by 123 nucleotidesAtu3910 and Atu3911 are separated by 11 nucleotidesAtu3911 and Atu3912 are separated by 7 nucleotidesAtu3912 and Atu3913 overlap by 4 nucleotides Atu3909: Atu3909 - hypothetical protein, at 1,008,352 to 1,009,593 Atu3909 Atu3910: Atu3910 - LamB/YcsF family protein, at 1,009,717 to 1,010,484 Atu3910 Atu3911: Atu3911 - hypothetical protein, at 1,010,496 to 1,011,305 Atu3911 Atu3912: Atu3912 - hypothetical protein, at 1,011,313 to 1,012,923 Atu3912 Atu3913: Atu3913 - biotin carboxylase, at 1,012,920 to 1,014,650 Atu3913
Group Condition Atu3909 Atu3910 Atu3911 Atu3912 Atu3913
nitrogen source L-pyroglutamic (N) -3.9 -4.0 -3.7 -3.7 -3.0
nitrogen source L-pyroglutamic (N) -3.4 -4.2 -3.2 -3.5 -3.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -4.6 -0.7 -4.8 -5.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.5 -4.5 -1.4 -4.6 -4.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -3.6 -1.2 -3.8 -6.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.5 -4.3 -1.2 -3.7 -3.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -3.9 -0.6 -3.9 -3.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 -2.9 -1.1 -4.2 -3.4
carbon source D-glutamine (C) -2.2 -2.7 -2.4 -2.3 -2.1
carbon source D-glutamine (C) -2.0 -1.8 -2.4 -2.2 -2.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 -3.6 -1.0 -2.9 -2.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.7 -2.8 -0.2 -3.1 -3.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -3.2 -0.2 -3.7 -2.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -2.5 +0.2 -3.5 -2.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 -2.1 -0.5 -3.1 -1.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.4 -1.9 -0.6 -2.6 -1.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 -1.7 -0.4 -2.2 -1.8
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 -1.7 -0.3 -2.1 -1.7
carbon source D-Galacturonic Acid (C) -0.1 -1.7 -0.5 -2.2 -1.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 -2.0 -0.7 -1.4 -1.3
carbon source D-Galacturonic Acid (C) -0.1 -2.0 -0.3 -1.7 -1.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.6 -1.2 -0.5 -1.8 -1.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.3 -1.5 -0.7 -1.3 -1.3
carbon source D-Saccharic potassium salt (C) +0.1 -2.0 +0.1 -2.1 -1.2
carbon source D-Saccharic potassium salt (C) +0.1 -1.4 +0.3 -2.0 -1.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -1.2 -0.5 -1.2 -1.4
carbon source NAG (C) +0.5 -1.2 +0.2 -2.1 -1.1
carbon source NAG (C) +0.4 -1.1 +0.5 -2.0 -1.0
stress R2A with Vancomycin 0.009 mM +0.7 +1.6 +1.0 +0.9 +1.1
stress R2A with Vancomycin 0.009 mM +0.9 +1.4 +0.4 +1.1 +1.4
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