Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu3901 and Atu3902 are separated by 5 nucleotidesAtu3902 and Atu3903 are separated by 5 nucleotidesAtu3903 and Atu3904 are separated by 13 nucleotidesAtu3904 and Atu3905 are separated by 113 nucleotides Atu3901: Atu3901 - nitrite reductase small subunit, at 999,115 to 999,450 Atu3901 Atu3902: Atu3902 - nitrite reductase large subunit, at 999,456 to 1,001,903 Atu3902 Atu3903: Atu3903 - nitrate ABC transporter ATPase, at 1,001,909 to 1,002,706 Atu3903 Atu3904: Atu3904 - nitrate ABC transporter permease, at 1,002,720 to 1,003,613 Atu3904 Atu3905: Atu3905 - nitrate ABC transporter substrate-binding protein, at 1,003,727 to 1,005,019 Atu3905
Group Condition Atu3901 Atu3902 Atu3903 Atu3904 Atu3905
nitrogen source nitrate (N) -3.0 -3.0 -2.6 -2.9 -2.8
nitrogen source nitrate (N) -2.8 -2.9 -2.6 -2.8 -3.0
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.2 -0.5 -0.2 -0.3
phage AgroPhage_C10 -0.3 +0.1 -0.5 -0.4 +0.0
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 +0.0 +0.1 -0.3 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.1 -0.3 +0.1 -0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.0 +0.1 -0.3 -0.2
phage AgroPhage_A01 -0.6 -0.0 +0.1 -0.3 +0.1
nitrogen source DL-2-Aminobutyric (N) -0.4 +0.2 +0.1 -0.2 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 +0.0 -0.2 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.2 -0.2 +0.2 +0.1
phage AgroPhage_A07 -0.4 -0.0 +0.2 -0.1 +0.2
phage AgroPhage_E10 -0.5 +0.3 -0.0 -0.0 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 -0.2 +0.3 +0.2 +0.0
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.0 -0.3 +0.4 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 -0.4 -0.0 +0.4
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 -0.0 -0.3 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.1 -0.2 -0.0 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +0.2 +0.2 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 +0.2 -0.1 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.1 -0.0 +0.3 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.6 +0.0 +0.1 -0.2 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.0 +0.2 -0.2 -0.2 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 -0.2 -0.0 +0.5 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.2 -0.0 +0.4 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.1 +0.3 -0.0 -0.1
nitrogen source L-Histidine (N) +0.4 +0.2 +0.2 +0.2 +0.1
nitrogen source L-Histidine (N) +0.3 +0.2 +0.2 +0.3 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.1 -0.1 +0.9 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.5 +0.1 +0.5 +0.3 +0.1
remove
Atu3901
plot		 remove
Atu3902
plot		 remove
Atu3903		 remove
Atu3904
plot		 remove
Atu3905
plot