Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3874	Atu3875	Atu3876	Atu3877	Atu3878
carbon source	L-(+)-Erythrulose (C)	+0.0	-0.1	-0.7	-0.2	-1.5
carbon source	L-(+)-Erythrulose (C)	+0.0	+0.1	-0.6	-0.0	-1.6
carbon source	D-(-)-lyxose (C)	-0.1	-0.0	-0.0	-0.1	-1.4
stress	R2A with m-arsenite 0.8 mM	+0.1	-0.1	+0.1	+0.2	-1.9
carbon source	D-Saccharic potassium salt (C)	+0.2	-0.2	-0.1	-0.0	-1.4
carbon source	NAG (C)	-0.0	-0.3	-0.1	-0.1	-1.1
carbon source	D-(-)-lyxose (C)	+0.1	-0.1	-0.0	+0.1	-1.6
stress	R2A with m-arsenite 0.8 mM	+0.0	-0.0	+0.1	-0.0	-1.6
carbon source	D-Galacturonic Acid (C)	-0.0	-0.1	+0.1	-0.1	-1.2
carbon source	NAG (C)	-0.0	-0.1	-0.1	+0.1	-1.0
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.4	-0.3	+0.1	-0.7
carbon source	D-Saccharic potassium salt (C)	+0.0	-0.0	+0.4	+0.2	-1.7
carbon source	D-Leucrose (C)	+0.1	+0.0	-0.1	+0.1	-1.1
carbon source	D-Arabinose (C)	+0.1	-0.0	+0.0	+0.1	-1.1
carbon source	D-Sorbitol (C)	+0.2	-0.4	-0.1	+0.1	-0.7
carbon source	D-Arabinose (C)	+0.1	-0.0	+0.1	+0.0	-1.1
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	-0.4	-0.5	+0.2	-0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.4	-0.0	+0.3	-0.6
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.0	+0.4	-0.2	-0.0	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	+0.3	+0.3	-0.2	-0.3
carbon source	methyl 3-keto-a-D-glucopyranoside (C)	-0.0	+0.2	+0.3	+0.1	-0.7
phage	AgroPhage_C04	-0.3	-0.3	+0.5	+0.0	+0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.3	+0.3	+0.3	-0.3
carbon source	D-Ribose (C)	+0.0	-0.3	+0.1	+0.0	+1.0
carbon source	L-ascorbate (C)	+0.0	-0.2	-0.0	+0.2	+1.1
carbon source	D-Ribose (C)	+0.1	-0.2	+0.0	+0.1	+1.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.6	+0.6	+0.3	-0.0
carbon source	L-ascorbate (C)	+0.1	-0.1	-0.1	+0.1	+3.3
carbon source	Xylitol (C)	+0.1	-0.2	-0.1	-0.1	+4.3
carbon source	Xylitol (C)	-0.1	-0.1	-0.1	-0.0	+4.6