Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3869 and Atu3870 are separated by 60 nucleotidesAtu3870 and Atu3871 are separated by 107 nucleotidesAtu3871 and Atu3872 are separated by 29 nucleotidesAtu3872 and Atu3873 are separated by 195 nucleotides Atu3869: Atu3869 - ABC transporter permease, at 962,082 to 963,704 Atu3869 Atu3870: Atu3870 - D-lactate dehydrogenase, at 963,765 to 964,778 Atu3870 Atu3871: Atu3871 - L-lactate dehydrogenase, at 964,886 to 966,031 Atu3871 Atu3872: Atu3872 - hypothetical protein, at 966,061 to 966,405 Atu3872 Atu3873: Atu3873 - hypothetical protein, at 966,601 to 967,581 Atu3873
Group Condition Atu3869 Atu3870 Atu3871 Atu3872 Atu3873
carbon source L-Rhamnose (C) -0.2 -0.3 -2.1 -0.0 +0.1
carbon source L-Rhamnose (C) -0.1 -0.1 -1.8 +0.0 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.1 -0.3 -0.4 -0.8
phage AgroPhage_D10 +0.2 -0.2 -0.1 -0.5 -0.3
lb control LB control -0.0 -0.2 -0.1 -0.8 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 +0.3 -0.2 -0.6 -0.3
carbon source L-Fucose (C) +0.1 -0.1 -0.7 +0.1 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 -0.2 -0.6 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 -0.3 -0.7 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 +0.2 -0.8 -0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.1 +0.0 -0.5 +0.4
phage AgroPhage_E10 +0.0 -0.4 +0.7 +0.2 -0.6
stress Chloramphenicol 12.5 ug/mL -0.2 +0.2 +0.7 -0.1 -0.4
phage AgroPhage_F03 +0.2 +0.2 -0.5 -0.1 +0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.3 -0.5 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 +0.4 -0.2 +0.4
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.3 -0.3 +0.5 -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.4 -0.2 +0.2 -0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.2 +0.4 -0.3 +0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.2 -0.1 -0.4 +0.8
stress R2A with Vancomycin 0.009 mM +0.2 +0.2 -0.2 -0.3 +0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.1 -0.4 +0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 +0.2 -0.3 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.1 +0.1 -0.7 +1.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.1 +0.5 +1.0 -0.3
Atjh15 +0.2 +0.5 -0.1 +0.6 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.2 +0.4 +0.2 +0.4
nitrogen source DL-2-Aminobutyric (N) +0.1 +0.4 -0.5 +0.7 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.0 +0.1 +0.5 +0.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.2 +0.6 -0.4 +0.8
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