Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3844 and Atu3845 are separated by 72 nucleotidesAtu3845 and Atu3846 are separated by 20 nucleotidesAtu3846 and Atu3847 are separated by 68 nucleotidesAtu3847 and Atu3848 are separated by 388 nucleotides Atu3844: Atu3844 - hypothetical protein, at 938,631 to 939,143 Atu3844 Atu3845: Atu3845 - hypothetical protein, at 939,216 to 939,896 Atu3845 Atu3846: Atu3846 - hypothetical protein, at 939,917 to 940,357 Atu3846 Atu3847: Atu3847 - hypothetical protein, at 940,426 to 940,947 Atu3847 Atu3848: Atu3848 - hypothetical protein, at 941,336 to 941,629 Atu3848
Group Condition Atu3844 Atu3845 Atu3846 Atu3847 Atu3848
stress Chloramphenicol 12.5 ug/mL +0.3 -0.6 -0.8 -0.5 +0.2
pH R2A pH 5.5 -0.4 -0.1 -0.1 -0.5 -0.3
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.2 -0.2 +0.1 -0.6 -0.3
Atjh15 -0.3 -0.4 -0.1 -0.5 +0.1
stress Chloramphenicol 12.5 ug/mL -0.3 -0.1 +0.2 -0.8 -0.1
phage AgroPhage_C04 -0.2 -0.5 -0.1 -0.6 +0.5
phage AgroPhage_E10 +0.5 -0.1 -0.2 -0.6 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.1 +0.4 -0.4 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.2 -0.2 +0.4 -0.1 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.1 +0.2 +0.2 -0.6
stress Erythromycin 12.5 ug/mL +0.4 -0.2 -0.1 +0.2 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.2 -0.2 -0.1 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.0 -0.0 -0.5 +0.9
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 -0.5 +0.3 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.5 -0.0 -0.2 -0.6
phage AgroPhage_E04 +0.3 -0.2 -0.4 +0.3 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 +0.4 +0.1 -0.4 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.5 -0.1 -0.1 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.6 +0.2 -0.2 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.0 +0.2 +0.6 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.3 +0.3 +0.9 -0.6
nitrogen source DL-2-Aminobutyric (N) -0.3 +0.3 -0.4 +0.6 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.0 +0.5 +0.5 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.0 +0.7 +0.3 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 +0.2 +0.6 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.4 +0.1 +0.3 +0.0
Atjh10 +0.2 +0.3 -0.0 +0.6 +0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.2 +0.7 +0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.0 +0.3 +0.9 +0.3
Atjh14 +0.2 +0.6 +0.2 +0.8 +0.2
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