Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3841 and Atu3842 overlap by 20 nucleotidesAtu3842 and Atu3843 are separated by 342 nucleotidesAtu3843 and Atu3844 are separated by 51 nucleotidesAtu3844 and Atu3845 are separated by 72 nucleotides Atu3841: Atu3841 - hypothetical protein, at 936,047 to 936,523 Atu3841 Atu3842: Atu3842 - hypothetical protein, at 936,504 to 937,094 Atu3842 Atu3843: Atu3843 - hypothetical protein, at 937,437 to 938,579 Atu3843 Atu3844: Atu3844 - hypothetical protein, at 938,631 to 939,143 Atu3844 Atu3845: Atu3845 - hypothetical protein, at 939,216 to 939,896 Atu3845
Group Condition Atu3841 Atu3842 Atu3843 Atu3844 Atu3845
pH R2A pH 5.5 -0.4 -0.5 -0.6 -0.4 -0.1
phage AgroPhage_C04 -0.6 -0.2 +0.0 -0.2 -0.5
pH R2A pH 5.5 -0.5 -0.1 -0.4 -0.4 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.3 -0.0 -0.4 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.4 -0.1 -0.3 -0.3
stress R2A with Vancomycin 0.009 mM -0.5 -0.3 -0.1 -0.0 +0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.1 +0.2 -0.0 -0.2
nitrogen source DL-2-Aminobutyric (N) -0.0 -0.6 +0.1 -0.3 +0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 -0.0 -0.6 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.4 -0.2 -0.5 +0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.4 -0.1 +0.1 +0.4
phage AgroPhage_E10 -0.5 +0.0 +0.0 +0.5 -0.1
r2a_control R2A control -0.2 -0.2 -0.2 +0.3 +0.3
phage AgroPhage_E04 -0.3 +0.4 -0.0 +0.3 -0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 -0.1 +0.3 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 -0.2 -0.4 +0.4
phage AgroPhage_A07 -0.3 +0.4 +0.2 +0.1 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.5 +0.1 +0.5 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.1 +0.2 +0.2 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.5 +0.2 +0.3 +0.2
stress R2A with Spectinomycin 0.002 mM -0.3 -0.2 +0.2 +0.5 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.0 +0.2 -0.2 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.6 +0.1 -0.1 +0.4
carbon source D-Sorbitol (C) +0.8 +0.3 +0.0 -0.0 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.4 +0.1 +0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.2 +0.0 +0.5 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.3 -0.1 +0.3 +0.6
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 +0.1 +0.3 +0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.2 -0.0 +0.3 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.5 +0.3 +0.8 -0.2
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