Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu3806 and Atu3807 are separated by 123 nucleotidesAtu3807 and Atu3808 are separated by 67 nucleotidesAtu3808 and Atu3809 are separated by 124 nucleotidesAtu3809 and Atu3810 are separated by 109 nucleotides Atu3806: Atu3806 - methionine gamma-lyase, at 902,788 to 904,071 Atu3806 Atu3807: Atu3807 - AsnC family transcriptional regulator, at 904,195 to 904,653 Atu3807 Atu3808: Atu3808 - LysR family transcriptional regulator, at 904,721 to 905,626 Atu3808 Atu3809: Atu3809 - oxidoreductase, at 905,751 to 906,617 Atu3809 Atu3810: Atu3810 - LysR family transcriptional regulator, at 906,727 to 907,620 Atu3810
Group Condition Atu3806 Atu3807 Atu3808 Atu3809 Atu3810
phage AgroPhage_D10 -0.3 -0.4 -0.4 +0.0 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.5 -0.3 -0.1 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -1.0 -0.2 -0.2 +0.0
lb_cucumber_cotlyden LB_cucumber_cotlyden -0.2 -0.4 -0.6 -0.2 +0.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 -1.3 +0.6 +0.2
phage AgroPhage_B07 +0.2 -0.7 +0.1 -0.2 -0.4
phage AgroPhage_C10 +0.1 -0.7 +0.3 -0.4 -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.2 +0.3 -0.2 -0.1
phage AgroPhage_E04 -0.5 -0.1 +0.4 -0.6 +0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.6 -0.0 +0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -0.5 +0.3 +0.1 -0.1
phage AgroPhage_E10 -0.0 -0.9 -0.1 +0.6 -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.9 +0.1 +0.3 -0.1
nitrogen source DL-2-Aminobutyric (N) -0.3 -0.6 +0.3 -0.0 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 -0.3 +0.2 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.5 +0.9 -0.4 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 +0.2 -0.5 -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.1 +0.6 -0.3 -0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.9 +0.2 +0.4 +0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.8 -0.2 -0.6 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.1 -0.4 +0.4 -0.2 +0.2
phage AgroPhage_H04 +0.1 +0.6 +0.2 -0.4 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 -0.1 +0.4 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.3 +0.5 -0.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 +0.8 -0.2 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.6 +0.2 +0.8 +0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.5 +0.3 +0.4 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.6 +0.1 +0.6 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.0 -0.1 +0.6 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +1.7 +0.1 +0.0 +0.3
remove
Atu3806
plot		 remove
Atu3807
plot		 remove
Atu3808		 remove
Atu3809
plot		 remove
Atu3810
plot