Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu3797 and Atu3798 are separated by 305 nucleotidesAtu3798 and Atu3799 are separated by 35 nucleotidesAtu3799 and Atu3800 are separated by 283 nucleotidesAtu3800 and Atu3801 are separated by 95 nucleotides Atu3797: Atu3797 - HlyD family secretion protein, at 892,422 to 893,498 Atu3797 Atu3798: Atu3798 - TetR family transcriptional regulator, at 893,804 to 894,418 Atu3798 Atu3799: Atu3799 - GntR family transcriptional regulator, at 894,454 to 895,437 Atu3799 Atu3800: Atu3800 - proline/glycine betaine ABC transporter substrate-binding protein, at 895,721 to 896,758 Atu3800 Atu3801: Atu3801 - proline/glycine betaine ABC transporter permease, at 896,854 to 897,711 Atu3801
Group Condition Atu3797 Atu3798 Atu3799 Atu3800 Atu3801
carbon source Ethyl benzoate (C) +0.7 -5.8 -0.5 -0.0 -0.0
carbon source Ethyl benzoate (C) +0.5 -4.0 -0.4 -0.1 +0.1
stress R2A with m-arsenite 0.8 mM -0.1 -1.6 -1.2 +0.0 -0.2
carbon source D-Saccharic potassium salt (C) -0.0 -0.8 -2.0 -0.0 -0.0
stress R2A with Polymyxin B sulfate 0.00075 mM -0.4 -2.1 -0.2 -0.0 -0.1
stress R2A with m-arsenite 0.8 mM +0.1 -1.5 -1.6 +0.1 +0.1
carbon source D-Saccharic potassium salt (C) +0.2 -0.6 -2.2 +0.1 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.6 -1.4 -0.2 -0.1
stress methyl jasmonate 5 mM +1.3 -3.6 +0.1 -0.0 +0.2
stress R2A with Tetracycline 0.002 mM +0.3 -1.9 -0.2 -0.0 +0.1
stress R2A with Tetracycline 0.002 mM +0.9 -1.4 -0.3 -0.2 -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -1.3 -0.4 -0.0 +0.4
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -1.6 -0.1 +0.3 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.9 -0.7 +0.2 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -1.0 -0.5 +0.4 +0.2
stress Dodecyl Sulfate 0.2 mM -3.7 +3.0 -0.3 +0.0 +0.1
stress Nerol 1.25 mM +0.4 -1.5 +0.0 +0.0 +0.2
stress methyl jasmonate 5 mM +1.3 -2.5 +0.2 +0.1 +0.3
stress Dodecyl Sulfate 0.2 mM -2.4 +1.8 -0.1 -0.0 +0.2
stress D(+)-Carvone 5 mM +0.8 -1.5 -0.1 +0.1 +0.2
nitrogen source DL-2-Aminobutyric (N) +0.9 -0.5 -0.4 -0.5 +0.0
stress D(+)-Carvone 5 mM +0.9 -1.5 +0.1 +0.1 +0.0
phage AgroPhage_C10 +0.1 +1.3 -0.6 -0.0 -0.1
stress Guaiacol 5 mM +2.1 -1.4 +0.1 -0.1 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.7 -0.6 +0.0 +0.6
stress Guaiacol 5 mM +1.9 -1.3 +0.2 -0.0 +0.2
stress R2A with Vancomycin 0.009 mM +0.1 +0.8 +1.2 -0.1 -0.1
stress R2A with Vancomycin 0.009 mM +0.4 +0.5 +1.3 -0.2 -0.0
nitrogen source Choline chloride (N) -0.0 -0.0 +2.8 -0.1 +0.0
nitrogen source Choline chloride (N) +0.0 -0.0 +3.0 -0.0 -0.1
remove
Atu3797
plot
remove
Atu3798
plot
remove
Atu3799
remove
Atu3800
plot
remove
Atu3801
plot