Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3788 and Atu3789 are separated by 12 nucleotidesAtu3789 and Atu3790 are separated by 217 nucleotidesAtu3790 and Atu3791 are separated by 552 nucleotidesAtu3791 and Atu3792 overlap by 4 nucleotides Atu3788: Atu3788 - potassium-transporting ATPase subunit C, at 878,126 to 878,692 Atu3788 Atu3789: Atu3789 - potassium-transporting ATPase subunit B, at 878,705 to 880,789 Atu3789 Atu3790: Atu3790 - potassium-transporting ATPase subunit A, at 881,007 to 882,710 Atu3790 Atu3791: Atu3791 - L-asparaginase, at 883,263 to 884,216 Atu3791 Atu3792: Atu3792 - L-asparagine permease, at 884,213 to 885,670 Atu3792
Group Condition Atu3788 Atu3789 Atu3790 Atu3791 Atu3792
stress R2A with m-arsenite 0.8 mM -0.5 +0.1 +0.1 -3.3 +0.1
stress R2A with m-arsenite 0.8 mM +0.1 -0.1 +0.1 -2.9 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 -0.6 -1.3 -0.2
nitrogen source L-Asparagine (N) -0.1 -0.1 +0.0 -1.5 -0.9
nitrogen source L-Asparagine (N) -0.0 +0.1 +0.1 -1.2 -0.8
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 -0.1 -0.6 -0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 -0.2 +0.1 -1.2 -0.1
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.2 -0.1 +0.7 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.0 +0.0 +1.0 -0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 -0.2 -0.0 -0.9 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.1 +0.1 -0.2 +1.0 -0.7
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.1 -0.2 +1.2 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.3 +0.1 -0.1 +1.4 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.1 -0.1 +1.5 -0.4
nitrogen source L-Histidine (N) +0.0 +0.1 +0.0 -0.8 +1.5
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.2 -0.3 +1.7 -0.3
nitrogen source L-Histidine (N) -0.0 +0.2 -0.0 -0.8 +1.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.2 +0.1 +1.2 -0.2
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.1 -0.1 +2.0 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 -0.1 -0.2 +1.7 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.4 -0.1 -0.0 +1.4 -0.1
nitrogen source L-Pipecolic Acid (N) -0.3 +0.0 +0.1 +1.2 +0.8
nitrogen source L-Pipecolic Acid (N) -0.1 +0.1 -0.0 +1.1 +0.8
carbon source L-Alanine (C) -0.2 +0.1 -0.0 +1.9 +0.4
carbon source L-Alanine (C) -0.1 +0.1 -0.1 +1.9 +0.5
nitrogen source L-Aspartic Acid (N) -0.1 +0.0 +0.1 +1.9 +1.6
nitrogen source L-Aspartic Acid (N) -0.2 +0.0 +0.0 +2.1 +1.7
carbon source D-Saccharic potassium salt (C) +0.4 -0.2 -0.2 +1.6 +2.8
carbon source D-Saccharic potassium salt (C) +0.1 +0.1 -0.0 +1.6 +2.9
nitrogen source DL-2-Aminobutyric (N) +1.1 +0.6 +0.3 -0.8 +10.1
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