Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3775 and Atu3776 are separated by 38 nucleotidesAtu3776 and Atu3777 are separated by 6 nucleotidesAtu3777 and Atu3778 are separated by 60 nucleotidesAtu3778 and Atu3779 are separated by 195 nucleotides Atu3775: Atu3775 - hypothetical protein, at 858,486 to 858,851 Atu3775 Atu3776: Atu3776 - hypothetical protein, at 858,890 to 859,264 Atu3776 Atu3777: Atu3777 - hypothetical protein, at 859,271 to 860,764 Atu3777 Atu3778: Atu3778 - UTP-glucose-1-phosphate uridylyltransferase, at 860,825 to 861,712 Atu3778 Atu3779: Atu3779 - lytic murein transglycosylase, at 861,908 to 863,128 Atu3779
Group Condition Atu3775 Atu3776 Atu3777 Atu3778 Atu3779
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 -0.3 -1.0 -0.7 -1.4
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.2 -1.2 -0.7 -1.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.3 -1.1 -0.4 -1.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.2 -1.1 -0.8 -1.0
stress R2A with Azlocillin 0.2 mM +0.0 -0.0 -0.1 +0.2 -3.6
stress R2A with Azlocillin 0.2 mM -0.1 -0.2 +0.1 +0.0 -2.9
stress R2A with Strontium chloride 750 mM -0.3 +0.1 -0.1 -0.1 -2.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.8 -0.6 -0.1 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -1.0 -1.5 -0.2 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.1 -0.4 +0.2 -1.7
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.9 -0.5 -0.3 +0.4 -0.1
stress D(+)-Carvone 5 mM -0.2 -0.0 +0.2 +0.3 -2.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.7 +0.8 -0.5 -0.1 -0.5
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 -0.4 -1.3 +0.0 -0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 -0.5 -1.4 -0.5 +0.1
carbon source L-ascorbate (C) -0.1 -0.1 -0.6 +0.7 -1.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 -0.7 -1.4 -0.0 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 -0.5 -1.2 -0.5 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 -0.7 -1.2 -0.2 -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 -0.3 -0.6 -0.4 -0.8
stress D(+)-Carvone 5 mM +0.4 -0.0 +0.1 +0.3 -2.0
stress R2A with Chloride 700 mM +0.8 +0.1 +0.3 +0.0 -1.9
carbon source L-ascorbate (C) +0.4 +0.2 -0.2 +0.6 -1.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -0.5 +1.3 +0.2 +0.0
phage AgroPhage_F10 -1.3 -0.2 +0.5 +0.4 +0.7
nitrogen source DL-2-Aminobutyric (N) -0.2 -0.3 +0.7 +1.2 -0.5
stress R2A with Vancomycin 0.009 mM -2.2 -0.9 -0.5 -0.8 +5.5
phage AgroPhage_F04 +1.1 +0.7 +0.5 -0.3 +0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +4.3 +0.2 -0.5 -0.3 -0.3
stress R2A with Vancomycin 0.009 mM +0.1 +0.1 -0.4 -0.5 +4.0
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