Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3772	Atu3773	Atu3774	Atu3775	Atu3776
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	-1.0	N.D.	-1.4	-0.7
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.8	-1.3	N.D.	-0.8	-0.2
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.3	N.D.	-1.9	-0.5
stress	R2A with Vancomycin 0.009 mM	+0.2	+0.0	N.D.	-2.2	-0.9
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-1.2	N.D.	-1.7	+0.8
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.1	-1.3	N.D.	-0.5	-0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.4	N.D.	-1.4	+0.1
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.1	N.D.	-1.1	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	-0.0	N.D.	-1.9	-0.1
no phage	P3L5	-0.1	-1.0	N.D.	-0.4	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	-1.3	N.D.	-0.2	-0.4
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.3	N.D.	-1.4	+0.1
phage	AgroPhage_C04	-0.2	-1.3	N.D.	-0.7	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	-0.9	N.D.	-0.4	-0.5
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	+0.1	-1.2	N.D.	+0.2	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.0	-1.0	N.D.	+0.5	-0.5
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.8	N.D.	+0.6	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	+0.6	N.D.	-1.2	-0.5
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.1	+1.0	N.D.	-1.3	+0.0
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.4	-0.9	N.D.	+0.6	-0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.9	N.D.	+0.2	+0.8
r2a_control	R2A control	-0.3	+0.2	N.D.	+1.1	-0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.0	N.D.	+1.5	-0.7
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	+0.0	N.D.	+0.7	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	+0.5	N.D.	+0.9	-0.5
phage	phage 95.1	-0.1	+0.8	N.D.	+0.9	-0.4
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+1.1	N.D.	-0.1	+0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.8	N.D.	+0.4	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	+0.4	N.D.	+0.4	+1.1
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.3	N.D.	+4.3	+0.2