Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3761 and Atu3762 overlap by 1 nucleotidesAtu3762 and Atu3763 are separated by 80 nucleotidesAtu3763 and Atu3764 are separated by 317 nucleotidesAtu3764 and Atu3765 are separated by 169 nucleotides Atu3761: Atu3761 - hypothetical protein, at 840,702 to 841,241 Atu3761 Atu3762: Atu3762 - pyruvate kinase, at 841,241 to 842,680 Atu3762 Atu3763: Atu3763 - hypothetical protein, at 842,761 to 844,524 Atu3763 Atu3764: Atu3764 - sigma 54 dependent transcriptional activator, at 844,842 to 846,383 Atu3764 Atu3765: Atu3765 - oligoendopeptidase F, at 846,553 to 848,403 Atu3765
Group Condition Atu3761 Atu3762 Atu3763 Atu3764 Atu3765
stress R2A with Strontium chloride 750 mM N.D. N.D. -5.8 -0.2 -0.1
stress R2A with Polymyxin B sulfate 0.00075 mM N.D. N.D. -5.7 -0.2 -0.3
stress R2A with Novobiocin 0.002 mM N.D. N.D. -5.8 +0.1 -0.1
stress R2A with Chloride 700 mM N.D. N.D. -5.5 -0.2 +0.0
stress R2A with Magnesium sulfate 400 mM N.D. N.D. -5.2 -0.1 +0.0
stress R2A with Chloride 700 mM N.D. N.D. -5.0 -0.1 -0.1
stress R2A with Spectinomycin 0.002 mM N.D. N.D. -4.4 -0.3 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -5.0 +0.4 -0.3
stress R2A with Strontium chloride 750 mM N.D. N.D. -4.3 -0.1 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -4.1 -0.3 -0.1
carbon source D-Glucuronic gamma lactone (C) N.D. N.D. -4.3 -0.1 +0.0
lb LB N.D. N.D. -4.0 -0.0 -0.2
carbon source Rhamnogalacturonan - from potato (C) N.D. N.D. -4.2 -0.0 +0.0
stress R2A with m-arsenite 0.8 mM N.D. N.D. -3.1 -1.0 +0.0
stress R2A with Spectinomycin 0.002 mM N.D. N.D. -3.7 -0.1 -0.3
stress R2A with Calcium Chloride Dihydrate 87.5 mM N.D. N.D. -4.0 +0.0 -0.2
stress R2A with Novobiocin 0.002 mM N.D. N.D. -3.9 -0.1 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. -4.0 +0.2 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. -3.9 +0.1 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -3.9 +0.2 -0.0
carbon source Betanin (C) N.D. N.D. -3.4 -0.5 +0.1
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -3.1 +0.5 +0.2
stress R2A with Vancomycin 0.009 mM N.D. N.D. -3.6 +1.4 +0.5
stress R2A with Vancomycin 0.009 mM N.D. N.D. -2.9 +1.3 +0.5
phage AgroPhage_D04 N.D. N.D. +4.3 +0.4 +0.0
phage AgroPhage_D10 N.D. N.D. +5.1 +0.6 -0.2
phage AgroPhage_E04 N.D. N.D. +4.8 +0.6 +0.2
phage AgroPhage_F04 N.D. N.D. +5.1 +0.5 +0.2
phage AgroPhage_F10 N.D. N.D. +5.3 +0.6 +0.1
phage AgroPhage_E10 N.D. N.D. +5.3 +0.6 +0.2
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