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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu3731 and Atu3732 overlap by 1 nucleotides
Atu3732 and Atu3733 are separated by 2 nucleotides
Atu3733 and Atu8191 are separated by 236 nucleotides
Atu8191 and Atu8192 are separated by 11 nucleotides
Atu3731: Atu3731 - 5-formyltetrahydrofolate cyclo-ligase, at 811,772 to 812,359
Atu3731
Atu3732: Atu3732 - hemolysin, at 812,359 to 813,636
Atu3732
Atu3733: Atu3733 - hypothetical protein, at 813,639 to 813,851
Atu3733
Atu8191: Atu8191 - hypothetical protein, at 814,088 to 814,465
Atu8191
Atu8192: Atu8192 - hypothetical protein, at 814,477 to 814,749
Atu8192
Group
Condition
Atu3731
Atu3732
Atu3733
Atu8191
Atu8192
carbon source
m-Inositol (C)
-5.7
-3.0
-0.7
-0.4
N.D.
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.4
-5.8
-1.2
-1.8
N.D.
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-1.3
-5.5
+0.3
-2.4
N.D.
carbon source
m-Inositol (C)
-6.3
-2.7
-0.4
+0.6
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-1.3
-5.8
+0.4
-1.3
N.D.
carbon source
Protocatechuic Acid (C)
-6.1
-1.2
+0.1
-0.6
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.4
-6.5
+0.9
-1.9
N.D.
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.9
-5.8
+0.9
-1.9
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.8
-5.7
-0.7
-0.5
N.D.
carbon source
acetate (C)
-5.9
-1.7
+0.3
-0.3
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.4
-4.4
-0.0
-2.7
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-1.0
-7.0
+1.7
-1.0
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.5
-5.6
-0.1
-1.0
N.D.
carbon source
L-Galactose (C)
-4.3
-1.7
-0.4
-0.7
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.5
-5.1
-0.2
-1.2
N.D.
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.6
-2.9
-0.7
-2.8
N.D.
carbon source
acetate (C)
-5.1
-1.6
-0.1
-0.2
N.D.
carbon source
Xylobiose (C)
-5.2
-0.9
-0.4
-0.4
N.D.
carbon source
L-Sorbose (C)
-4.2
-1.3
-0.5
-0.8
N.D.
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.8
-4.8
+0.6
-1.6
N.D.
carbon source
Protocatechuic Acid (C)
-5.4
-1.1
-0.0
-0.0
N.D.
carbon source
palatinose (C)
-4.8
-0.7
-0.3
-0.8
N.D.
carbon source
D-Glucuronic gamma lactone (C)
-5.3
-1.2
-0.1
+0.1
N.D.
carbon source
L-Sorbose (C)
-4.3
-1.2
+0.1
-0.9
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.9
-5.8
+0.6
-0.2
N.D.
carbon source
L-ascorbate (C)
-4.6
-1.7
-0.4
+0.6
N.D.
carbon source
L-ascorbate (C)
-4.4
-1.6
+0.0
+0.5
N.D.
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-1.1
-5.5
+0.5
+0.9
N.D.
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.4
-2.2
+1.5
-2.7
N.D.
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
-1.7
+3.7
-1.1
N.D.
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