Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3729 and Atu3730 are separated by 304 nucleotidesAtu3730 and Atu3731 are separated by 99 nucleotidesAtu3731 and Atu3732 overlap by 1 nucleotidesAtu3732 and Atu3733 are separated by 2 nucleotides Atu3729: Atu3729 - hypothetical protein, at 809,890 to 810,543 Atu3729 Atu3730: Atu3730 - hypothetical protein, at 810,848 to 811,672 Atu3730 Atu3731: Atu3731 - 5-formyltetrahydrofolate cyclo-ligase, at 811,772 to 812,359 Atu3731 Atu3732: Atu3732 - hemolysin, at 812,359 to 813,636 Atu3732 Atu3733: Atu3733 - hypothetical protein, at 813,639 to 813,851 Atu3733
Group Condition Atu3729 Atu3730 Atu3731 Atu3732 Atu3733
carbon source Protocatechuic Acid (C) -0.1 -3.6 -6.1 -1.2 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -2.6 -0.4 -5.8 -1.2
carbon source m-Inositol (C) +0.2 -1.0 -5.7 -3.0 -0.7
carbon source m-Inositol (C) +0.1 -0.7 -6.3 -2.7 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -2.8 -1.3 -5.8 +0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -2.5 -1.3 -5.5 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -2.1 -0.8 -5.7 -0.7
carbon source L-Galactose (C) -0.0 -2.7 -4.3 -1.7 -0.4
carbon source acetate (C) +0.1 -1.9 -5.9 -1.7 +0.3
carbon source Fumarate (C) +0.1 -3.4 -4.1 -1.3 -0.0
carbon source p-Coumaric (C) -0.0 -2.3 -4.3 -1.2 -0.6
carbon source L-Sorbose (C) +0.1 -2.6 -4.2 -1.3 -0.5
carbon source L-Sorbose (C) +0.1 -2.9 -4.3 -1.2 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -2.6 -0.9 -5.8 +0.6
carbon source acetate (C) +0.1 -1.6 -5.1 -1.6 -0.1
carbon source NAG (C) -0.3 -5.0 -2.4 -0.4 -0.1
carbon source Protocatechuic Acid (C) -0.0 -1.4 -5.4 -1.1 -0.0
carbon source NAG (C) +0.1 -2.9 -3.7 -0.9 -0.4
carbon source Xylobiose (C) -0.0 -1.3 -5.2 -0.9 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -1.9 -0.5 -5.1 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -1.8 -0.4 -6.5 +0.9
carbon source Ribitol (C) +0.2 -1.8 -4.7 -0.7 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -2.0 -0.8 -4.8 +0.6
carbon source D-Quinic (C) +0.3 -2.6 -3.6 -1.0 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 -0.9 -5.8 +0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +1.2 -1.1 -5.5 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +1.2 -1.0 -7.0 +1.7
carbon source L-ascorbate (C) -0.0 +2.2 -4.6 -1.7 -0.4
carbon source L-ascorbate (C) +0.1 +1.7 -4.4 -1.6 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +2.5 -0.5 -5.6 -0.1
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